Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1466 ACTGTGAACGCTCCACCACCGTTCCTTAGTAAGACGTATGACATGGTGGATGACCCGGCCTCTGATGCGATCGTGTCTTGGAGCCCAACCAACAATAGCTTTGTGGTTTGGAACCCTCCAGAGTTTGCCAGAGATCTCTTGCCTAAGTACTTCAAGCACAATAATTTCTCCAGCTTTGTGAGGCAGCTGAACACTTATGGTTTTCGAAAGGTGGATCCAGATCGATGGGAATTTGCAAATGAGGGCTTTTTAAGGGGTCAGAAGCACTTGCTTAAGAGTATTACTCGACGAAAACCTGCCCATGGCCATAATAATCAACAAGTACAGCAGTCACAAGGACATAGTTCTTCAGTAGGGGCATGTGTAGAAGTGGGGAAGTTTGGACTTGAAGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGGCAGCAGCAACAGACCACTGATAACCGGCTGCAGACAATGGTTCAGCGCCTTCAAGGAATGGAACAACGACAACAGCAAATGATGTCATTCCTTGCCAAGGCTGTACAGAGCCCTGGCTTTTTTGCTCAGTTTGTGCAACCAAACGAGAGCAATAGACGCATAACTGAAGCCAACAAAAAACGGCGGCTTAAGCAGGAAGGTATTGCTGAAACAGAGTGTTCTACTCCTTCTCCTGATGGACAAATTGTTAAGTATCAACCTCTTATGAATGAAGCGGCAAAAGCAATGCTAACGAAGATAATGAAATTGGATGGTTCACAGCTGGAATCTTTTAATAACAACCTTGATAACTACTTGATTGGGGATGGATCATCATCATCCAGTGCAATGGACAGCAGTAGCTCTTCAAGCTGGACTTCTGGAGTTACACTCCAAGAGGTCCAACCAACTTCTGTGCAGTCTTCTCACATTCCAGCTGCATCAGGAGCTTCAGGGCCCTTAGCTGACAAATCTGAAATCCCATCTACAAAAACTGCACCTGCTCTCTCTGCTTCTCAGGTAGGCGTCATAATACCTGAGCTTTCGCCCATACCAGAGATGGTGACAGAAAATGTTCTTGAAGAAAATTATGTCAGATCTGCGATGGACAATTCAGATCCTACTTTTGGACTGAATGAGTCATTGACCCCTGATGTTGGTAGCATTTCTCCTGATGCAGACATTGATGATTTGTTACGCAATCCTTCCTTTGGGATGATTTTCTTTGCAAAGTCCATTACTGAGGATATTGAGATCATTGCTGCTGAAGCAGTGTCCAATGAGGTGCAGCCAATGGAAGACGGTTGGGACAAAGCTGAACACATGAGCCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTGATCCAAGAGCAGGTTGA 1371 0.4522 TVNAPPPFLSKTYDMVDDPASDAIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHNNQQVQQSQGHSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNRLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQXNESNRRITEANKKRRLKQEGIAETECSTPSPDGQIVKYQPLMNEAAKAMLTKIMKLDGSQLESFNNNLDNYLIGDGSSSSSAMDSSSSSSWTSGVTLQEVQPTSVQSSHIPAASGASGPLADKSEIPSTKTALXALSASQVGVIIPELSPIPEMVTENVLEENYVRSAMDNSDPTSXGLNESLTPDVGSISPDADIDDLLRNPSFGMIFFAKSITEDIEIIAAEAVSNEVQPMEDGWDKAEHMSQLTEQMGLLSSDPRAG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1466 459 MobiDBLite consensus disorder prediction 367 386 - -
Prci10g1466 459 SMART hsfneu3 4 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g1466 459 MobiDBLite consensus disorder prediction 100 115 - -
Prci10g1466 459 FunFam Heat shock transcription factor 1 1 98 - -
Prci10g1466 459 SUPERFAMILY "Winged helix" DNA-binding domain 4 97 IPR036390 -
Prci10g1466 459 Coils Coil 126 153 - -
Prci10g1466 459 Gene3D - 2 98 IPR036388 -
Prci10g1466 459 MobiDBLite consensus disorder prediction 274 324 - -
Prci10g1466 459 ProSitePatterns HSF-type DNA-binding domain signature. 47 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g1466 459 MobiDBLite consensus disorder prediction 367 394 - -
Prci10g1466 459 Pfam HSF-type DNA-binding 8 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g1466 459 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 280 IPR027725 -
Prci10g1466 459 PRINTS Heat shock factor (HSF) domain signature 8 31 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g1466 459 PRINTS Heat shock factor (HSF) domain signature 46 58 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g1466 459 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g1466 459 MobiDBLite consensus disorder prediction 93 115 - -
Prci10g1466 459 MobiDBLite consensus disorder prediction 274 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1466 Prci-Chr10 9871383 9874754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1466 3 453 HSF AT1G32330 55.011 8.34e-160 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci10g1466 HSF_DNA-bind 2.9e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1466 K09419 - gmx:100815121 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1466 10 9871383 9874754 Prci10g1466 10 9871383 9874754 ECH