Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1459 ATGTATGGGGATTGTCAAGTGATGTCAAGCATGGGAGGTAACGTGGTGGTAAACTCAGAAACGCTCTTCTCTTCGTCAATCCAAAACTCAAACTTCAACTTCATGCCCACCATGCCTTTCCAGCCCTTTCAACCTCCCATGACGACACAGAAAGAAGAAGACGGGATAATGATGCGAGGGAAGGAAGAGATCATGGAGAGCGGGTCTGGTAGCGAGCAAGCTGATCATGACAAGTCTGGGAACGAGCAAGACAGTGAACAGCCAGCCAAGAAGAAGCGTTATCACAGGCATACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCTCACCCGGACGACAAGCAAAGGATGAAATTAAGCCAGGAGCTGGGTTTGAAGCCGCGACAAGTGAAGTTCTGGTTTCAGAATCGTCGAACTCAGATGAAGGCACAACAAGATCGAACTGACAATGTGATACTGAGAGCAGAAAATGAGAACCTGAAGAATGAGAACTATCGTCTGCAAGCAGCTTTGCGCAATGTGATGTGTCCTAATTGTGGTGGTCCAGCCATGATGGGTGGTGATCTGGGCATGGATGACCATCAGCTTCGCCTTGAAAATGCTCGCCTTAGAGAAGAGCTAGATCGCGTTTGTTGTCTCACTTCGAGATACACAGGCCGTCCAATGCAAACAATGGCGTCACCAGCTCCTTCTCTGTTGGCTCCTTCATTGGATTTGGACATGAACACATACTCAAGGCACTTTCCTGATCCTGTTACTTCTTGTACCTCGGAGATGATTCCTGTCCCTATGCTGCCTCATCCGGATACTTCACCATTCCCAGACGGTGGTCTCTTGTTAATGGAAGACGAGAAATCTCTGGCATTGGAGCTCGCACTGTCGTCCATGGATGAACTCCTCAAGATGTGTCACGTAAACGAGCCTCTTTGGATGAGAAACAGTGAGAATGAGAGGGAAATGCTCAATTTTGAGGAGCATGCGAGGCTGTTTCATTGGCCTCTGAATTTCAAGAACCATTCGCCTGGACTCAGGAGAGAAGCTAGCCGTGACACTGCTGTGGTCATAATGAATAGCGTCACTCTTGTTGACGCCTTCCTTGATGCTATTAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTCCAAATCATATCGTCGGGTGCTTCTGGTCATGCAAGTGGGTCTCTTCAGCTGATGTACGCAGAATTACAGGTGATTTCTCCCTTAGTGCCAACTCGTGAGACTCATTTTCTTCGTTATTGCCAGCAAAACGCTGAGGAGGGAACCTGGGCCATTGTTGATTTCCCCCTTGATAGTTTCCACGAAAATTTTCACCACTCTTATCCCAGATATTGCAGGCGACCCTCCGGCTGTATTATTCAAGACATGCCAAATGGATACTCAAGAGTGACATGGGTGGAGCACGCAGAGGTGGAAGAGAAACCAGTGCATCAGATATTCAGTAACTATGTGTACAGTGCAATGGCGTTCGGAGCACAGCGTTGGTTGGGAGTTTTGCAGAGGCAATGTGAGAGGGTCGCGAGCCTCATGGCAAGGAATATTTCAGACCTTGGAGTGATACCCTCACCAGAAGCGAGGAAGAACTTGATGAAACTGGCTCAGAGAATGATAAGAACGTTTAGCCTGAACATGAGCACCTCGAGTGGTCAATCATGGACGGCATTGTCAGACTCTCCTGAAGACACTGTTAGAATTACAACAAGGAAGATAACTAACCCAGGCCAACCTAATGGCGTCATACTCAGTGCAGCCTCCACCACCTGGCTTCCTTATTCTCACTCCAAGGTCTTTGACCTCCTCAAGGACGAACGTCGCAGATCTCAGCAGTTGGATTTTCTCTCCAATGGGAACTCTTTGCATGAAGTGGCTCATATTGCTAACGGCTCACATCCAGGAAATTGCATCTCTCTTTTGCGCATAAATGTGGCGAGCAACTCATCGCAGAGCGTAGAGCTAGTGGTGCAAGAGAGTTGCACCGACCAGTCGGGAAGTCTGGTGGTGTACGCCACCATCGACGTCGAATCAATTCAGCTCGCCATGTCCGGTGAGGACCCTTCCTCCGTAGCTCTTCTTCCGCAAGGCTTCCACATCGTTCCCGCAACAACTTCCGTCACCAATATCAATGCCAATTCGACCGAAGCATCAGCCACCACCGTCGCACCCCCGCCGCCGCTACATTCTTCTTCTCTGAACCAAGCTTGTCTCCTTACAGTGGGCCTCCAAGTTCTGGCAAGCACTATCCCTTCTGCGAAACTCAACCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAATACTCTGCACCAAATTGAAGCTGCTCTTTGCAGTGATCATAATGGCACTTTTTTCGGGTCCTGCACTGAACCCGCCACTACGGACACCCCTAAGCAATAG 2442 0.4902 MYGDCQVMSSMGGNVVVNSETLFSSSIQNSNFNFMPTMPFQPFQPPMTTQKEEDGIMMRGKEEIMESGSGSEQADHDKSGNEQDSEQPAKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRTDNVILRAENENLKNENYRLQAALRNVMCPNCGGPAMMGGDLGMDDHQLRLENARLREELDRVCCLTSRYTGRPMQTMASPAPSLLAPSLDLDMNTYSRHFPDPVTSCTSEMIPVPMLPHPDTSPFPDGGLLLMEDEKSLALELALSSMDELLKMCHVNEPLWMRNSENEREMLNFEEHARLFHWPLNFKNHSPGLRREASRDTAVVIMNSVTLVDAFLDAIKWMELFPTIVSRAKTVQIISSGASGHASGSLQLMYAELQVISPLVPTRETHFLRYCQQNAEEGTWAIVDFPLDSFHENFHHSYPRYCRRPSGCIIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSAMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSPEDTVRITTRKITNPGQPNGVILSAASTTWLPYSHSKVFDLLKDERRRSQQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQSVELVVQESCTDQSGSLVVYATIDVESIQLAMSGEDPSSVALLPQGFHIVPATTSVTNINANSTEASATTVAPPPPLHSSSLNQACLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALCSDHNGTFFGSCTEPATTDTPKQ 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1459 813 SMART START_1 294 520 IPR002913 GO:0008289
Prci10g1459 813 Gene3D - 340 512 IPR023393 -
Prci10g1459 813 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Prci10g1459 813 FunFam Homeobox-leucine zipper protein HDG1 78 164 - -
Prci10g1459 813 Gene3D - 76 159 - -
Prci10g1459 813 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 87 790 IPR042160 -
Prci10g1459 813 SMART HOX_1 89 152 IPR001356 GO:0003677
Prci10g1459 813 SUPERFAMILY Bet v1-like 287 522 - -
Prci10g1459 813 CDD homeodomain 91 149 IPR001356 GO:0003677
Prci10g1459 813 SUPERFAMILY Homeodomain-like 80 149 IPR009057 -
Prci10g1459 813 CDD START_ArGLABRA2_like 289 519 - -
Prci10g1459 813 MobiDBLite consensus disorder prediction 64 98 - -
Prci10g1459 813 Pfam START domain 294 520 IPR002913 GO:0008289
Prci10g1459 813 Coils Coil 147 177 - -
Prci10g1459 813 MobiDBLite consensus disorder prediction 64 91 - -
Prci10g1459 813 ProSiteProfiles START domain profile. 285 523 IPR002913 GO:0008289
Prci10g1459 813 Pfam Homeodomain 91 146 IPR001356 GO:0003677
Prci10g1459 813 SUPERFAMILY Bet v1-like 538 787 - -
Prci10g1459 813 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1459 Prci-Chr10 9812001 9817450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1459 8 790 Homeobox Transcription Factor Family AT5G46880 57.414 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci10g1459 START 3.1e-42 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1459 - - gmx:100812829 1228