Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1456 ATGTATGGGGATTGTCAAGTGATGTCAAGCATGGGAGGTAACGTGGTGGTAAACTCAGAAACGCTCTTCTCTTCGTCAATCCAAAACTCAAACTTCAACTTCATGCCCACCATGCCTTTCCAGCCCTTTCAACCTCCCATGAAAGAAGAAGACGGGATAATGATGCGAGGGAAGGAAGAGATCATGGAGAGCGGGTCTGGTAGCGAGCAAGCTGATCATGACAAGTCTGGGAACGAGCAAGACAGTGAACAGCCAGCCAAGAAGAAGCGTTATCACAGGCATACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCTCACCCGGACGACAAGCAAAGGATGAAATTAAGCCAGGAGCTGGGTTTGAAGCCGCGACAAGTGAAGTTCTGGTTTCAGAATCGTCGAACTCAGATGAAGGCACAACAAGATCGAACTGACAATGTGATACTGAGAGCAGAAAATGAGAACCTGAAGAATGAGAACTATCGTCTGCAAGCAGCTTTGCGCAATGTGATGTGTCCTAATTGTGGTGGTCCAGCCATGATGGGTGGTGATCTGGGCATGGATGACCATCAGCTTCGCCTTGAAAATGCTCGCCTTAGAGAAGAGCTAGATCGCGTTTGTTGTCTCACTTCGAGATACACAGGCCGTCCAATGCAAACAATGGCGTCACCAGCTCCTTCTCTGTTGGCTCCTTCATTGGATTTGGACATGAACACATACTCAAGGCACTTTCCTGATCCTGTTACTTCTTGTACCTCGGAGATGATTCCTGTCCCTATGCTGCCTCATCCGGATACTTCACCATTCCCAGACGGTGGTCTCTTGTTAATGGAAGACGAGAAATCTCTGGCATTGGAGCTCGCACTGTCGTCCATGGATGAACTCCTCAAGATGTGTCACGTAAACGAGCCTCTTTGGATGAGAAACAGTGAGAATGAGAGGGAAATGCTCAATTTTGAGGAGCATGCGAGGCTGTTTCATTGGCCTCTGAATTTCAAGAACCATTCGCCTGGACTCAGGAGAGAAGCTAGCCGTGACACTGCTGTGGTCATAATGAATAGCGTCACTCTTGTTGACGCCTTCCTTGATGCTATTAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTCCAAATCATATCGTCGGGTGCTTCTGGTCATGCAAGTGGGTCTCTTCAGCTGATGTACGCAGAATTACAGGTGATTTCTCCCTTAGTGCCAACTCGTGAGACTCATTTTCTTCGTTATTGCCAGCAAAACGCTGAGGAGGGAACCTGGGCCATTGTTGATTTCCCCCTTGATAGTTTCCACGAAAATTTTCACCACTCTTATCCCAGATATTGCAGGCGACCCTCCGGCTGTATTATTCAAGACATGCCAAATGGATACTCAAGAGTGACATGGGTGGAGCACGCAGAGGTGGAAGAGAAACCAGTGCATCAGATATTCAGTAACTATGTGTACAGTGCAATGGCGTTCGGAGCACAGCGTTGGTTGGGAGTTTTGCAGAGGCAATGTGAGAGGGTCGCGAGCCTCATGGCAAGGAATATTTCAGACCTTGGAGTGATACCCTCACCAGAAGCGAGGAAGAACTTGATGAAACTGGCTCAGAGAATGATAAGAACGTTTAGCCTGAACATGAGCACCTCGAGTGGTCAATCATGGACGGCATTGTCAGACTCTCCTGAAGACACTGTTAGAATTACAACAAGGAAGATAACTAACCCAGGCCAACCTAATGGCGTCATACTCAGTGCAGCCTCCACCACCTGGCTTCCTTATTCTCACTCCAAGGTCTTTGACCTCCTCAAGGACGAACGTCGCAGATCTCAGTTGGATTTTCTCTCCAATGGGAACTCTTTGCATGAAGTGGCTCATATTGCTAACGGCTCACATCCAGGAAATTGCATCTCTCTTTTGCGCATAAATGTGGCGAGCAACTCATCGCAGAGCGTAGAGCTAGTGGTGCAAGAGAGTTGCACCGACCAGTCGGGAAGTCTGGTGGTGTACGCCACCATCGACGTCGAATCAATTCAGCTCGCCATGTCCGGTGAGGACCCTTCCTCCGTAGCTCTTCTTCCGCAAGGCTTCCACATCGTTCCCGCAACAACTTCCGTCACCAATATCAATGCCAATTCGACCGAAGCATCAGCCACCACCGTCGCACCCCCGCCGCCGCTACATTCTTCTTCTCTGAACCAAGCTTGTCTCCTTACAGTGGGCCTCCAAGTTCTGGCAAGCACTATCCCTTCTGCGAAACTCAACCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAATACTCTGCACCAAATTGAAGCTGCTCTTTGCAGTGATCATAATGGCACTTTTTTCGGGTCCTGCACTGAACCCGCCACTACGGACACCCCTAAGCAATAG 2430 0.4897 MYGDCQVMSSMGGNVVVNSETLFSSSIQNSNFNFMPTMPFQPFQPPMKEEDGIMMRGKEEIMESGSGSEQADHDKSGNEQDSEQPAKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRTDNVILRAENENLKNENYRLQAALRNVMCPNCGGPAMMGGDLGMDDHQLRLENARLREELDRVCCLTSRYTGRPMQTMASPAPSLLAPSLDLDMNTYSRHFPDPVTSCTSEMIPVPMLPHPDTSPFPDGGLLLMEDEKSLALELALSSMDELLKMCHVNEPLWMRNSENEREMLNFEEHARLFHWPLNFKNHSPGLRREASRDTAVVIMNSVTLVDAFLDAIKWMELFPTIVSRAKTVQIISSGASGHASGSLQLMYAELQVISPLVPTRETHFLRYCQQNAEEGTWAIVDFPLDSFHENFHHSYPRYCRRPSGCIIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSAMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSPEDTVRITTRKITNPGQPNGVILSAASTTWLPYSHSKVFDLLKDERRRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQSVELVVQESCTDQSGSLVVYATIDVESIQLAMSGEDPSSVALLPQGFHIVPATTSVTNINANSTEASATTVAPPPPLHSSSLNQACLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALCSDHNGTFFGSCTEPATTDTPKQ 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1456 809 SUPERFAMILY Bet v1-like 553 783 - -
Prci10g1456 809 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Prci10g1456 809 SMART HOX_1 86 149 IPR001356 GO:0003677
Prci10g1456 809 Pfam START domain 291 517 IPR002913 GO:0008289
Prci10g1456 809 CDD homeodomain 88 146 IPR001356 GO:0003677
Prci10g1456 809 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Prci10g1456 809 CDD START_ArGLABRA2_like 286 516 - -
Prci10g1456 809 SMART START_1 291 517 IPR002913 GO:0008289
Prci10g1456 809 Coils Coil 144 174 - -
Prci10g1456 809 SUPERFAMILY Homeodomain-like 77 146 IPR009057 -
Prci10g1456 809 MobiDBLite consensus disorder prediction 61 94 - -
Prci10g1456 809 SUPERFAMILY Bet v1-like 284 519 - -
Prci10g1456 809 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 84 786 IPR042160 -
Prci10g1456 809 FunFam Homeobox-leucine zipper protein HDG1 75 161 - -
Prci10g1456 809 ProSiteProfiles START domain profile. 282 520 IPR002913 GO:0008289
Prci10g1456 809 Gene3D - 73 156 - -
Prci10g1456 809 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Prci10g1456 809 MobiDBLite consensus disorder prediction 61 88 - -
Prci10g1456 809 Gene3D - 337 509 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1456 Prci-Chr10 9812001 9817450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1456 8 786 Homeobox Transcription Factor Family AT5G46880 57.926 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci10g1456 START 3e-42 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1456 - - gmx:100812829 1240.71