Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1454 ATGGAGCTATTCCCGGCACAGCCAGATTTGTCTCTGCAAATCAGCCCTCCAAACACCAAACCTAGTTCCAATTGGAGGAGAGATGGTGCAGAGGTGGATTTGGGGTTCTGGAAGAGAGCTTTGGACTCTTCAAACTCTTCATTGCCCAAACCCAAACCTTCTGATAATAATCACCATCTTTTTCTCACTCATCATCACTCCTTCGACCTCTCTCTCTCCTCCTCCTCCATTAATATCACTTCCACACCAACCCCTCCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACTCTACAGCAACAACAACATCCATGGCCGCCACCACCGTCTCTTCTTCCAAAACGGCAACAATAATGCCAATCCCTTGCCATCGTCGTCGTCATTTCACCACCACCACCACCACCAGAGGCTGGCCCAAGACCTGGGCTTTCTCAGACCCATCAGAGGAATTCCTCTCTACCAAAACCCTCCTCCTCCTCCTTCTAATATCCCATTTGGTGGTCTTGTTGATGCTGCTAATTATTCCACTGTTACTCTTCCTCATCCTCCTCCTCCTCCTCCTCCGTCTTCTGTATCTAACATGACGACCTCCACAACTTCGACCACTTTTCAATCTCACCAAGGTTTGATGAGGTCTAGGTTGTTGTCTCGCTTTCCTGCTAAGCGCGGCATAAGAGCTCCTCGGATGCGTTGGACTACCACTCTCCATGCTCGCTTTGTCCATGCCGTTGAGCTTCTGGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTCTTGAGCTAATGGATGTCAAGGATCTTACTTTAGCTCATGTTAAATCTCATCTCCAGATGTACCGAACGGTGAAAACAACAGATAAAGCAGCAGCATCCTCAGGAGGTCTGATCTATCTACCAAGCAAACAACATCAAGTGCTATTAAAGAACAACATGGGCTTTGGAGCAACTCTTCCAGGGAAGTTTGGTTGCATGGGAAGCCAAAGCTGGATTACTGTGCAGGAAACTTGA 1011 0.4787 MELFPAQPDLSLQISPPNTKPSSNWRRDGAEVDLGFWKRALDSSNSSLPKPKPSDNNHHLFLTHHHSFDLSLSSSSINITSTPTPPSSSSSSSSSSSSLYSNNNIHGRHHRLFFQNGNNNANPLPSSSSFHHHHHHQRLAQDLGFLRPIRGIPLYQNPPPPPSNIPFGGLVDAANYSTVTLPHPPPPPPPSSVSNMTTSTTSTTFQSHQGLMRSRLLSRFPAKRGIRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGGLIYLPSKQHQVLLKNNMGFGATLPGKFGCMGSQSWITVQET 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1454 336 MobiDBLite consensus disorder prediction 11 25 - -
Prci10g1454 336 Pfam Myb-like DNA-binding domain 230 281 IPR001005 -
Prci10g1454 336 MobiDBLite consensus disorder prediction 194 210 - -
Prci10g1454 336 NCBIfam myb-like DNA-binding domain, SHAQKYF class 229 282 IPR006447 GO:0003677
Prci10g1454 336 MobiDBLite consensus disorder prediction 1 27 - -
Prci10g1454 336 MobiDBLite consensus disorder prediction 184 210 - -
Prci10g1454 336 Gene3D - 228 285 - -
Prci10g1454 336 MobiDBLite consensus disorder prediction 79 128 - -
Prci10g1454 336 FunFam Myb family transcription factor 227 285 - -
Prci10g1454 336 MobiDBLite consensus disorder prediction 79 139 - -
Prci10g1454 336 SUPERFAMILY Homeodomain-like 226 282 IPR009057 -
Prci10g1454 336 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 295 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1454 Prci-Chr10 9769131 9773968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1454 101 294 G2-like Transcription Factor Family AT4G17695 50.490 2.69e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci10g1454 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1454 - - mnt:21400729 259.225