Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1453 ATGGAGCTATTCCCGGCACAGCCAGATTTGTCTCTGCAAATCAGCCCTCCAAACACCAAACCTAGTTCCAATTGGAGGAGAGATGGTGCAGAGGTGGATTTGGGGTTCTGGAAGAGAGCTTTGGACTCTTCAAACTCTTCATTGCCCAAACCCAAACCTTCTGATAATAATCACCATCTTTTTCTCACTCATCATCACTCCTTCGACCTCTCTCTCTCCTCCTCCTCCATTAATATCACTTCCACACCAACCCCTCCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACTCTACAGCAACAACAACATCCATGGCCGCCACCACCGTCTCTTCTTCCAAAACGGCAACAATAATGCCAATCCCTTGCCATCGTCGTCGTCATTTCACCACCACCACCACCACCAGAGGCTGGCCCAAGACCTGGGCTTTCTCAGACCCATCAGAGGAATTCCTCTCTACCAAAACCCTCCTCCTCCTCCTTCTAATATCCCATTTGGTGGTCTTGTTGATGCTGCTAATTATTCCACTGTTACTCTTCCTCATCCTCCTCCTCCTCCTCCTCCGTCTTCTGTATCTAACATGACGACCTCCACAACTTCGACCACTTTTCAATCTCACCAAGGTTTGATGAGGTCTAGGTTGTTGTCTCGCTTTCCTGCTAAGCGCGGCATAAGAGCTCCTCGGATGCGTTGGACTACCACTCTCCATGCTCGCTTTGTCCATGCCGTTGAGCTTCTGGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTCTTGAGCTAATGGATGTCAAGGATCTTACTTTAGCTCATGTTAAATCTCATCTCCAGATGTACCGAACGGTGAAAACAACAGATAAAGCAGCAGCATCCTCAGGGCAATCTGATATATATGACAATGGATCATCTGGAGATAATTCTGAAGATTTAATGTTTGACATGGACAATTCAAGGAGGTCTGATCTATCTACCAAGCAAACAACATCAAGTGCTATTAAAGAACAACATGGGCTTTGGAGCAACTCTTCCAGGGAAGTTTGGTTGCATGGGAAGCCAAAGCTGGATTACTGTGCAGGAAACTTGAGTTCTTTTGAGAAGGAGATGGATCCAAAATGCCAAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATCTTTCAGGAACAAGCCCCAAGAAACCAAATTTGGATTTGGATTTGGAGTTTAGTTTAGGGCAGCCACTTTGA 1233 0.4623 MELFPAQPDLSLQISPPNTKPSSNWRRDGAEVDLGFWKRALDSSNSSLPKPKPSDNNHHLFLTHHHSFDLSLSSSSINITSTPTPPSSSSSSSSSSSSLYSNNNIHGRHHRLFFQNGNNNANPLPSSSSFHHHHHHQRLAQDLGFLRPIRGIPLYQNPPPPPSNIPFGGLVDAANYSTVTLPHPPPPPPPSSVSNMTTSTTSTTFQSHQGLMRSRLLSRFPAKRGIRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSDIYDNGSSGDNSEDLMFDMDNSRRSDLSTKQTTSSAIKEQHGLWSNSSREVWLHGKPKLDYCAGNLSSFEKEMDPKCQSYERVSDGSASSDLSGTSPKKPNLDLDLEFSLGQPL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1453 410 SUPERFAMILY Homeodomain-like 226 282 IPR009057 -
Prci10g1453 410 MobiDBLite consensus disorder prediction 1 27 - -
Prci10g1453 410 MobiDBLite consensus disorder prediction 194 211 - -
Prci10g1453 410 NCBIfam myb-like DNA-binding domain, SHAQKYF class 229 282 IPR006447 GO:0003677
Prci10g1453 410 Gene3D - 228 285 - -
Prci10g1453 410 MobiDBLite consensus disorder prediction 79 128 - -
Prci10g1453 410 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 69 409 IPR044847 GO:0000976|GO:0006355|GO:0010158
Prci10g1453 410 MobiDBLite consensus disorder prediction 378 393 - -
Prci10g1453 410 MobiDBLite consensus disorder prediction 369 410 - -
Prci10g1453 410 MobiDBLite consensus disorder prediction 11 25 - -
Prci10g1453 410 MobiDBLite consensus disorder prediction 286 311 - -
Prci10g1453 410 Pfam Myb-like DNA-binding domain 230 281 IPR001005 -
Prci10g1453 410 MobiDBLite consensus disorder prediction 184 211 - -
Prci10g1453 410 FunFam Myb family transcription factor 227 285 - -
Prci10g1453 410 MobiDBLite consensus disorder prediction 286 314 - -
Prci10g1453 410 MobiDBLite consensus disorder prediction 79 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1453 Prci-Chr10 9768619 9773963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1453 101 402 G2-like Transcription Factor Family AT4G17695 45.397 1.06e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci10g1453 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1453 - - aprc:113868756 421.394