Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1442 ATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGGATCTTATCCTTTTAGTTCCTTTGCCATGCCTTCTCCGAATGGTATTGCAGAGCCTTCTGGAAACACTCTTGGAAACATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGAAAGAATGTTGAACATAATAAAACACCAGGGACATCTGCTAATGGAGTTCATTCAAAAAGGTATCTCGTTGGTGAAAGTGCAAGTGAAGGTACCAGTGAAGGAAGCGATGCAAATTCTGAGAATGACTCACAGCTGAAATCAGAGGAAAGGCATGACTCTTTGGGAGCTGAACCGTCTCAGAATGGAGGTTCAGGGCGTGCTCCTCAAAACGGGGGACTTAATACACCTCACAATATGGTCAATCAAACTATGAGTATCATGCCTATATCTGCTGCTGGTGCTCCTGGTGGAGTTTCTGGTCCCACGACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCCACTTCATCCACTATTCCTGCACTGCGTGGAAAGGTTCCTTCTACTGCTGTTGCTGGAGGAATTGTTACTGCTGGATCACGGGAGAGTGTTCAGTCACAACTTTGGGTGCAGGATGAAAGAGAGCTAAAGAGACAGAGACGAAAGCAATCTAATAGGGAATCAGCTCGCAGATCTAGGTTGCGCAAGCAGGCTGAATGTGATGAACTAGCCCAGCGAGCTGAGGCTTTAAAGGAAGAGAATGCTTCTCTCCGCTCTGAAGTGAATCGGATAAGGAGTGAATACGAGCAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTCGGGGAATTACCTGAGAACAACGGGGAACATTTGCCTAGCCGGAATGACCAACATGTGGATAGTGACACTCAACAGGCCGAGCAGACACAAGCCGTGCAGGGTGGTCGTTAG 1029 0.4636 MCGVSSILCLLMVPHHIHMLQCILMVGSYPFSSFAMPSPNGIAEPSGNTLGNMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNVEHNKTPGTSANGVHSKRYLVGESASEGTSEGSDANSENDSQLKSEERHDSLGAEPSQNGGSGRAPQNGGLNTPHNMVNQTMSIMPISAAGAPGGVSGPTTNLNIGMDYWGAPTSSTIPALRGKVPSTAVAGGIVTAGSRESVQSQLWVQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGELPENNGEHLPSRNDQHVDSDTQQAEQTQAVQGGR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1442 342 Gene3D - 240 294 - -
Prci10g1442 342 MobiDBLite consensus disorder prediction 42 162 - -
Prci10g1442 342 Pfam bZIP transcription factor 237 299 IPR004827 GO:0003700|GO:0006355
Prci10g1442 342 MobiDBLite consensus disorder prediction 328 342 - -
Prci10g1442 342 SMART brlzneu 237 301 IPR004827 GO:0003700|GO:0006355
Prci10g1442 342 SUPERFAMILY Leucine zipper domain 240 296 IPR046347 GO:0003700|GO:0006355
Prci10g1442 342 Coils Coil 257 305 - -
Prci10g1442 342 MobiDBLite consensus disorder prediction 140 162 - -
Prci10g1442 342 CDD bZIP_plant_GBF1 242 292 IPR045314 GO:0003700|GO:0006355
Prci10g1442 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 239 302 IPR004827 GO:0003700|GO:0006355
Prci10g1442 342 PANTHER G-BOX-BINDING FACTOR 3-RELATED 31 329 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci10g1442 342 MobiDBLite consensus disorder prediction 75 98 - -
Prci10g1442 342 MobiDBLite consensus disorder prediction 306 342 - -
Prci10g1442 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 244 259 IPR004827 GO:0003700|GO:0006355
Prci10g1442 342 MobiDBLite consensus disorder prediction 306 327 - -
Prci10g1442 342 Pfam Disordered region downstream of MFMR 64 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1442 Prci-Chr10 9676057 9681545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1442 1 331 bZIP Transcription Factor Family AT2G35530 55.882 1.33e-113 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci10g1442 MFMR_assoc 9.5e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1442 K09060 - gmx:100101882 493.426