Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1440 ATGGATAAAACCCCAAGAGAAAAGGAGCCAAAGACACCTCCGGTGATGTCACAGGAGCAGTCGTCAACTCCTGGCACTGGAACAATTAATCCAGATTGGTCCAGCTTTCAGGCATTTTCTCCAATGCCTCCACATGGGTTCTTAGCATCAAGTCCCCAAGCTCACCCATATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGTATATATGCTCATCCATCTATGCCTTCGGGATCTTATCCTTTTAGTTCCTTTGCCATGCCTTCTCCGAATGGTATTGCAGAGCCTTCTGGAAACACTCTTGGAAACATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGAAAGAATGTTGAACATAATAAAACACCAGGGACATCTGCTAATGGAGTTCATTCAAAAAGGTATCTCGTTGGTGAAAGTGCAAGTGAAGGTACCAGTGAAGGAAGCGATGCAAATTCTGAGAATGACTCACAGCTGAAATCAGAGGAAAGGCATGACTCTTTGGGAGCTGAACCGTCTCAGAATGGAGGTTCAGGGCGTGCTCCTCAAAACGGGGGACTTAATACACCTCACAATATGGTCAATCAAACTATGAGTATCATGCCTATATCTGCTGCTGGTGCTCCTGGTGGAGTTTCTGGTCCCACGACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCCACTTCATCCACTATTCCTGCACTGCGTGGAAAGGTTCCTTCTACTGCTGTTGCTGGAGGAATTGTTACTGCTGGATCACGGGAGAGTGTTCAGTCACAACTTTGGGTGCAGGATGAAAGAGAGCTAAAGAGACAGAGACGAAAGCAATCTAATAGGGAATCAGCTCGCAGATCTAGGTTGCGCAAGCAGGCTGAATGTGATGAACTAGCCCAGCGAGCTGAGGCTTTAAAGGAAGAGAATGCTTCTCTCCGCTCTGAAGTGAATCGGATAAGGAGTGAATACGAGCAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTCGGGGAATTACCTGAGAACAACGGGGAACATTTGCCTAGCCGGAATGACCAACATGTGGATAGTGACACTCAACAGGCCGAGCAGACACAAGCCGTGCAGGGTGGTCGTTAG 1227 0.4662 MDKTPREKEPKTPPVMSQEQSSTPGTGTINPDWSSFQAFSPMPPHGFLASSPQAHPYVWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPSGSYPFSSFAMPSPNGIAEPSGNTLGNMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNVEHNKTPGTSANGVHSKRYLVGESASEGTSEGSDANSENDSQLKSEERHDSLGAEPSQNGGSGRAPQNGGLNTPHNMVNQTMSIMPISAAGAPGGVSGPTTNLNIGMDYWGAPTSSTIPALRGKVPSTAVAGGIVTAGSRESVQSQLWVQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGELPENNGEHLPSRNDQHVDSDTQQAEQTQAVQGGR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1440 408 MobiDBLite consensus disorder prediction 1 37 - -
Prci10g1440 408 MobiDBLite consensus disorder prediction 291 325 - -
Prci10g1440 408 MobiDBLite consensus disorder prediction 141 164 - -
Prci10g1440 408 Coils Coil 323 371 - -
Prci10g1440 408 MobiDBLite consensus disorder prediction 372 408 - -
Prci10g1440 408 MobiDBLite consensus disorder prediction 372 393 - -
Prci10g1440 408 MobiDBLite consensus disorder prediction 206 228 - -
Prci10g1440 408 Pfam bZIP transcription factor 303 365 IPR004827 GO:0003700|GO:0006355
Prci10g1440 408 Gene3D - 306 359 - -
Prci10g1440 408 SMART brlzneu 303 367 IPR004827 GO:0003700|GO:0006355
Prci10g1440 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 305 368 IPR004827 GO:0003700|GO:0006355
Prci10g1440 408 Pfam G-box binding protein MFMR 7 91 IPR012900 -
Prci10g1440 408 CDD bZIP_plant_GBF1 308 358 IPR045314 GO:0003700|GO:0006355
Prci10g1440 408 PANTHER G-BOX-BINDING FACTOR 3-RELATED 10 395 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci10g1440 408 SUPERFAMILY Leucine zipper domain 306 362 IPR046347 GO:0003700|GO:0006355
Prci10g1440 408 MobiDBLite consensus disorder prediction 14 37 - -
Prci10g1440 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 310 325 IPR004827 GO:0003700|GO:0006355
Prci10g1440 408 MobiDBLite consensus disorder prediction 120 228 - -
Prci10g1440 408 MobiDBLite consensus disorder prediction 394 408 - -
Prci10g1440 408 Pfam Disordered region downstream of MFMR 130 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1440 Prci-Chr10 9676057 9682469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1440 1 397 bZIP Transcription Factor Family AT2G35530 62.624 7.75e-162 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci10g1440 MFMR_assoc 1.4e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1440 K09060 - gmx:100101882 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1440 10 9676057 9682469 Prci10g1440 10 9676057 9682469 ECH