Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1439 ATGGCCGCACAACCTGAGTTTGAGCATCCAACAAAGGCCTTCGGATGGGCTGCTAGGGATCCTTCCGGGCTCCTCTCCCCTTTCAACTTTTCTCGAAGGGAAACCGGAGAAAAAGATGTGGCGTTCAAAGTGCTCTACTGTGGAATATGCCACTCCGACCTCCACATGCTCAAGAACGAATGGGGCTTCTCCGTCTACCCACTCGTACCTGGGCACGAGATTGCTGGGGTGGTGACAGAAGTGGGAAGCAAGGTGCGAAAATTCAAAGTGGGAGACAAGGTTGGTGTGGGATGCATGGTGGGGTCTTGCCGATCCTGTCAGAGTTGTTCCGACGACCTTGAGAACCACTGCTCAAAACACATCCTCACTTACGGTGCCAAGTACGTTGATGGAACTATCACATATGGAGGCTACTCCGACTTCATGGTCGCCGACGAGCACTTTGTGGTTCGCATTCCAGAAGCGTTACCTCTTGATGCTGCGGCTCCTCTGCTTTGTGCTGGGATCACTGTGTACAGCCCTCTCAGATATTTTGGTCTCGACAAGCCAGACCTTCATGTGGGTGTGGTCGGTCTCGGTGGCCTCGGCCATATGGCAGTCAAGTTCGCCAAAGCTTTTGGAGCTAATGTCACTGTCATCAGTACTTCTCCTAGCAAGAAGAAGGAAGCCGTTGAACATCTAGGGGCTGATTCCTTTGTTGTCAGCCGCGATCAAGATCAGATGCAGGCTGTGATGGGAACCTTTGATGGTATAATTGACACAGTTTCTGCAATGCATCCTCTCTTGCCTTTGATTGGTCTATTGAAGCCCAATGGCAAGCTTGTGTTGGTTGGTGCGCCTGAGAAGCCTCTGGAGCTGCCAGTATTTCCCTTACTTGGGGGGAGAAAGACAGTTGCTGGAAGTGGCATTGGAGGGATGAAGGAGACGCAAGAGATGGTAGATTTTGCTGCAAAGCATAACATAAGACCTGACATAGAAGTGATTCCCATGGATTATGTGAACACTGCTATGGAGCGTCTCCTTAAAGCTGATGTCAAATATCGTTTTGTGATTGATATTGGCAACACATTGAAGCCAGCCACTTAA 1086 0.5009 MAAQPEFEHPTKAFGWAARDPSGLLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMLKNEWGFSVYPLVPGHEIAGVVTEVGSKVRKFKVGDKVGVGCMVGSCRSCQSCSDDLENHCSKHILTYGAKYVDGTITYGGYSDFMVADEHFVVRIPEALPLDAAAPLLCAGITVYSPLRYFGLDKPDLHVGVVGLGGLGHMAVKFAKAFGANVTVISTSPSKKKEAVEHLGADSFVVSRDQDQMQAVMGTFDGIIDTVSAMHPLLPLIGLLKPNGKLVLVGAPEKPLELPVFPLLGGRKTVAGSGIGGMKETQEMVDFAAKHNIRPDIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTLKPAT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1439 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Prci10g1439 361 SUPERFAMILY GroES-like 8 199 IPR011032 -
Prci10g1439 361 CDD CAD1 14 352 IPR047109 GO:0016616
Prci10g1439 361 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Prci10g1439 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Prci10g1439 361 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Prci10g1439 361 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Prci10g1439 361 Gene3D - 16 353 - -
Prci10g1439 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Prci10g1439 361 FunFam Uncharacterized protein 16 166 - -
Prci10g1439 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Prci10g1439 361 Gene3D - 167 323 - -
Prci10g1439 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1439 Prci-Chr10 9618494 9620300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1439 12 359 Monolignol Biosynthesis Gene Families AT4G37990 73.276 1.50e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1439 K23232 - gmx:100809071 619.002