Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1417 ATGGCCGAGAGTGCAGTGTCGTTTCTACTGAGCAAGCTGACTTCCATACTCGAAGAACAAGTGCAGCTGCTGAGTGGAGTTCACAAAGAGGTTCAGTTCATCAAAGATGAACTAGAGCGCCTCAGTGCCATCTTAAGGGTGGCTGATTCTTTGGAGGACGAAGACCCTGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTGGCTCATGACATGGAAGATGCCATAGATGAGTTCACTATTCGCCTTGTGAGTCATCGTGAGCAAGGCCAAAATTCTTGTCTCAGCAGGTTTTCTTCCGCCATCAAGGCTCTCAGAGCTCGGCATTGGATTGCTTCTGAGATTCAAGAGATCAAAGGCAGATTGGAAAACATCTCAAAGGGTCGTTGCAACATGACTGAGACTGGATCAAGCTTCCGTAATCAGTATACATCAAGGCTTGATAGCCAAGACGATGCGCTTTTGCTTGATGAAGCTGACCTTGTGGGTATTGAGAAGCCTAAAAAGCATTTAATTGACTTACTTTTCGAGGAGGAACCTGGAAGAGTAGTGATTCCTATTTATGGAATGGGAGGATTGGGGAAAACCACGCTGGCAAAGCAGGTCTATGATGACCCAAAAGTGAAGAAGCTTTTCAGGATGCACGCATGGGTCACTATTTCCCAATCTTTCAAGATCCATGAGCTCCTAAGAGAGCTGGTTCAACAGCTCCATAAAGTTATAGGAAAATCAGCTCCTGCAGAAGTTGGCACCATGAAAAGTGGCAGTCTAAAGGAGGTGATCAAGAGTTTGCTTCTGCAAAGAAGGTACCTGATCATCCTGGATGACATTTGGCGAGTAAATGCATGGGATGCTATTCAACATGCTTTGCCTAACAACAACTATGGCAGTAGAATCATACTCACAACTCGGAATAAGGATGTAGCAGCTTATTCTTGCACCAAATTCCATGATAAGGTCTATAACTTGGATTTTTTGCCTCAGCATGAATCATGGTCTCTTTTTTGTAACAAGACCTTTCGAGGGAATCCATGTCCTCCTCATTTGGAGGAGTCTTGCAAGTGTATCTTGAAAAGATGTGGGGGATTGCCTCTTGCAATTGAGGCAATCAGTGGTGTTCTGGCTTCAAAAGACAGAACCAACTTGGAAGAATGGTTGATTGTTTGTAAGAGTTTTGCATCTGAAATTGAAGGCAACGACAAACTGGAGGATACAAAGAAAGTGCTTTGTTTAATTTTCAACGATTTGCCATATTATCCTAAATCATGTTTGTTGTACCTAATCATCTTTCCAGAATTTTATGCTATTGAACGTATCAAGTTGATTCGGTTGTGGATAGCTGAAGGATTTGTCAATGGAGAAGAAGGAATGACACCAGAAGAAGTTGCAGAGAGTTATCTGAAGGAGCTCCTGAATAGGAGTTTGATACAAGTGGTAGAGAAACACAGTGATGGCAGGATCAAGACTTGTCGTATCCATGAGTTTCTACGGGAGATCATCAATTTAAAGTCAAGAGATCAGAACTTTGCAACAATAGCCAAAGACCAGGACATAATCTGGCCAGAGAAAGTTCGTCGTCTATCAGTAATGAATAGTTTACAGAACATACAGCAAACTAAGACCTCATTCCAACTACGTTCTCTGCTATTGTTTGCTTTATCTGATTCACTGGGTCATTTCTCCATATCTACATTATTTTCAAATAATTGCAGGCTACTTAGGGTGTTACATTTGCAGGATGCACCTTTGGAGTCGTTTCCTGCAGAGATTGTCAACCTTTTCCACCTCAAGTATCTAAGCTTGAAGAGTACGAAGGTGAAAAATATCCCAACCTCCATCAAGAAGCTTCAAAATTTGGAGACATTAGATCTCAAACATTCCTATGTCACTGAATTACCACCTGAAATCTTGGAGCTGCATCAACTACGCCACCTCCTGGTGTATCGCTATAAGATTGAATCCTATGACAATTTCAACTCAAGGCGTGGTTTCAAGTTGCCAGGCTTGATTGGATGTATGCAATCTCTGCAGAAGCTTTGTTTCATAGAAGCAGACCAAGGAAGTCAAGACTTGATGGTTGAACTAGGAAAGCTAACCCAACTCAGGAGGCTGGGTATGAGAAAGCTGAAGAAAGAAGATGGGGCTGCTTTGTGCTCGTCCATTCAGAAGATGACCAATCTCAGGTCTCTGTCCATAACCGCAAGAAAAGATTATGAGATCATTGATATTCAGAACATAGCCAAGCCTCCTACATACCTTCGGCGATTGTACTTAAGAGGACGTTTAGAGAAGTTACCTAAATGGATTACCTCTCTCCAAAATTTGGTCAGACTGTATCTAAAATGGAGCAGTTTAAAGGAGGATCCTCTAATATATCTTCAAGATTTGCCCAATCTAATACAACTTGAGTTTCTGCAGGTTTATGTTGGCGAGAAATTGCATTTCAAACCAAATGGATTTCCAAGTCTGAAGCTTTTGGGCCTCGATGATTTAACTAATCTGAAATCTATGCTTGTAGAGGAGGGGGCGATGGCTAATTTAAAAAGGCTGATCATCCAGCGATGCGGATCATTGAAGCAGGTGCCTTTAGGCTTAGAACATTTGACCAAGTTAAAATCAGTCGGTTTCCTTGATATGCCTGATGAACTGGTCATGGCAATACATCCCAAAGGAGGTCAAGATCACTGGAGAGTAGACCACATACCAGTTGTTCATTCAATCTACTGGAGGTCAGGTGGTTGGGATGTTTACTCAATAGAAACTTCAGGGGGAACACGAACAGAGAGTTCTTCTAGTTTTAGTGCTTCAATGACAAGTCATGAACTTCGTTCTCTCTGGGAATTCTAA 2847 0.4208 MAESAVSFLLSKLTSILEEQVQLLSGVHKEVQFIKDELERLSAILRVADSLEDEDPELKVWVKQVRDVAHDMEDAIDEFTIRLVSHREQGQNSCLSRFSSAIKALRARHWIASEIQEIKGRLENISKGRCNMTETGSSFRNQYTSRLDSQDDALLLDEADLVGIEKPKKHLIDLLFEEEPGRVVIPIYGMGGLGKTTLAKQVYDDPKVKKLFRMHAWVTISQSFKIHELLRELVQQLHKVIGKSAPAEVGTMKSGSLKEVIKSLLLQRRYLIILDDIWRVNAWDAIQHALPNNNYGSRIILTTRNKDVAAYSCTKFHDKVYNLDFLPQHESWSLFCNKTFRGNPCPPHLEESCKCILKRCGGLPLAIEAISGVLASKDRTNLEEWLIVCKSFASEIEGNDKLEDTKKVLCLIFNDLPYYPKSCLLYLIIFPEFYAIERIKLIRLWIAEGFVNGEEGMTPEEVAESYLKELLNRSLIQVVEKHSDGRIKTCRIHEFLREIINLKSRDQNFATIAKDQDIIWPEKVRRLSVMNSLQNIQQTKTSFQLRSLLLFALSDSLGHFSISTLFSNNCRLLRVLHLQDAPLESFPAEIVNLFHLKYLSLKSTKVKNIPTSIKKLQNLETLDLKHSYVTELPPEILELHQLRHLLVYRYKIESYDNFNSRRGFKLPGLIGCMQSLQKLCFIEADQGSQDLMVELGKLTQLRRLGMRKLKKEDGAALCSSIQKMTNLRSLSITARKDYEIIDIQNIAKPPTYLRRLYLRGRLEKLPKWITSLQNLVRLYLKWSSLKEDPLIYLQDLPNLIQLEFLQVYVGEKLHFKPNGFPSLKLLGLDDLTNLKSMLVEEGAMANLKRLIIQRCGSLKQVPLGLEHLTKLKSVGFLDMPDELVMAIHPKGGQDHWRVDHIPVVHSIYWRSGGWDVYSIETSGGTRTESSSSFSASMTSHELRSLWEF 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1417 948 PANTHER DISEASE RESISTANCE PROTEIN RP 27 856 IPR044974 GO:0006952
Prci10g1417 948 PRINTS Disease resistance protein signature 184 199 - -
Prci10g1417 948 PRINTS Disease resistance protein signature 614 630 - -
Prci10g1417 948 PRINTS Disease resistance protein signature 360 374 - -
Prci10g1417 948 PRINTS Disease resistance protein signature 264 278 - -
Prci10g1417 948 Gene3D Ribonuclease Inhibitor 529 883 IPR032675 -
Prci10g1417 948 Pfam NB-ARC domain 165 411 IPR002182 GO:0043531
Prci10g1417 948 Gene3D - 152 316 IPR027417 -
Prci10g1417 948 Gene3D - 4 112 - -
Prci10g1417 948 FunFam Probable disease resistance protein At1g61300 149 316 - -
Prci10g1417 948 CDD RX-CC_like 2 127 IPR038005 -
Prci10g1417 948 Gene3D - 413 505 IPR036388 -
Prci10g1417 948 Pfam Rx N-terminal domain 5 93 IPR041118 -
Prci10g1417 948 SUPERFAMILY L domain-like 508 881 - -
Prci10g1417 948 FunFam Probable disease resistance protein At1g63360 413 502 - -
Prci10g1417 948 Gene3D - 326 412 IPR042197 -
Prci10g1417 948 Coils Coil 34 54 - -
Prci10g1417 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1417 Prci-Chr10 9490359 9493771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1417 185 627 WRKY Transcription Factor Family AT5G45050 21.861 1.06e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1417 K13457 - qsa:O6P43_033382 1238.79