LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g1415	ATGGCAGAGAGTCCGGTGTTGTTCTTACTGGACAAGCTAACATCTTTGCTGCAAGAAGAGGTGCAACTGCTTAAGGGTGTTCGCACAGAGGTTCAGTTCATCAAAGATGAACTTGAGCGCCTCAAGGCCATCTTAAGGATGGCTGATGCGTTGGAGGACAAAGACCCTGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTAGCTCACGACATGGAAGACGCCATTGACGAGTTCACCATTCGCCTTGTGAATCACCGTGGCCATGGCCACGATTCTGCTCTCAGAAGGTTTGCTTCATCCATCCAAGCTCTCAGAGCTCGGCACCGGATTGCTTCTAACTTACAAGAGATCAAAGCCAGAGTGGAAAACATCTCAAAGGGTCGTCGCAGCATAACTGAGGCCGGGTCAAGCTCCAGTCATTTTCACAAGTCGAGGCTTGATAGTCAAGGAGATGCACTTCTGCTCGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAGCAGCTGATTGACTTGCTTTTCCAGGAGGAGCAAGGAAAGGTGGTGATACCTATCTATGGAATGGGTGGGCTGGGGAAAACCACGGTGGCAAAGCAGGTCTATGATGACCCAAAATTGAAGAAGCGTTTCAAGATGCATGCTTGGGTCACAGTTTCCCAATCTTTCAAGATCAAGGAGCTCCTAAGAGACCTGGTTCAACAGCTTTATAAAGTTATAGGGAAACCAGCTCCTGCAGAAGTTGGCACAATGAAAAGTGACAATCTGAAGGAGGTGGTCAAGAGTCTGCTTCAACAAAGCAGGTATCTCATCGTCCTGGATGACATATGGCGGGTAAATGCTTGGGATGCTATCAAACTTGCTTTGCCTAACAACAACTATGGCAGTAGAATAATGCTCACCACAAGAAACAGAGAAGTAGCACTTTCTTGCTGCACTGAGTTGCAAGGCAAGACCTATAACCTGGAATTCTTACCTGAGCATGAAGCATGGTCTCTTTTCTGCAAGAAAACATTTCAGGGGAATGCATGTCCTCCACATTTGGAGGAGTCTTGCAAGACTATCTTGAAAAGATGTGGGGGATTGCCGCTAGCAATTGTGGCAATCAGTGGTGCTTTGGCCACAAAAGACAAGACCAACATAGAAGAATGGCTGGTTGTTAGCAGAAGTATTGCATCTGAAATTGAAAGCAGTGACAGAATGGAGGATATGAACAAAGTGCTTTCCCTAAGTTTCAACGAATTGCCTTACTATCTTAAATCCTGTTTGTTGTACCTGATCATCTTTCCAGAATTTTATGCCATTGAGCATATGAGGTTGATTCGCTTGTGGATAGCTGAAGGGTTTGTCACTGGAGAAGAAGGAAGGACGCTGGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACAGGAGCCTGATTCAAGTGGTAGAGAAAGGCAGTGATGGCAGGATGAAGACTTGTCGTGTTCACGACTTTCTACGGGACATCATCAATTTGAAGTCAAAAGATCAAAACTTTGCAACATTGGCCACCGACCAGGACATGATATGGCCAGAAAGAGTTCGTCGCCTGTCAGTAATGAATAGTTTACAGAACGTACAGCAAAACAGAACCTCATTCCAATTGCGTTCTCTGCTATTATTTTCTTTAGCAGATTCACATGATGATATCTCCATATCTTCACTATTCTCAAATGGTTGTAGGCTGCTCAAGGTACTAGATTTGCAAGATGCACCTTTGGAATCGTTTCCTGCTGAGATTGTCAACCTTTACCACCTGAAGTATCTAAGCCTGAAGAATACCAAGGTGAAAAGCATTCCAGCTTCCATTAAGAAGCTTCAAAACCTGGAAACATTAGATCTGAAACACTCCCATGTAACTGAATTGCCAGCTGAAATCCTGGAGCTGCATCGACTGCGCCACCTCCTGGTGTATCGTTATGAGATTGAATCCTATGCTCACTTCTTCTCAAGGAATGGTTTCAAGCTGCCAGGCCCAATAGGATGTATGCAATCTCTGCAAAAGCTTTGTTTCATAGAGGCAGACCAAGGAAGTCAAGACTTGATGGTTGAATTAGGCAAGCTGACTCAACTGAGGAGGCTGGGCATTAGAAAGCTGAAGAAAGAAGATGGGGCTGCTTTGTGCTCATCCATTCAGAAGATGACCAATCTCAGGTCTCTATCCATAACTGCAATCGAAGAAGATGAGATCATTGACATTCAGAACATTGTCAAGCCTCCTCCATACCTGAGACAATTGTACTTATGTGGACGTCTAGGGAAGTTACCTGAATGGATACCCTCTCTCCACAATCTGGTCAGAGTATACTTGAAATGGAGCAGGTTTTTGTTGGAGAGACATTGCATTTCAAGGCAGAGAAATTTCCAAGTTTGA	2403	0.4474	MAESPVLFLLDKLTSLLQEEVQLLKGVRTEVQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVNHRGHGHDSALRRFASSIQALRARHRIASNLQEIKARVENISKGRRSITEAGSSSSHFHKSRLDSQGDALLLEEADLVGIEKPKKQLIDLLFQEEQGKVVIPIYGMGGLGKTTVAKQVYDDPKLKKRFKMHAWVTVSQSFKIKELLRDLVQQLYKVIGKPAPAEVGTMKSDNLKEVVKSLLQQSRYLIVLDDIWRVNAWDAIKLALPNNNYGSRIMLTTRNREVALSCCTELQGKTYNLEFLPEHEAWSLFCKKTFQGNACPPHLEESCKTILKRCGGLPLAIVAISGALATKDKTNIEEWLVVSRSIASEIESSDRMEDMNKVLSLSFNELPYYLKSCLLYLIIFPEFYAIEHMRLIRLWIAEGFVTGEEGRTLEEVAESYLKELLNRSLIQVVEKGSDGRMKTCRVHDFLRDIINLKSKDQNFATLATDQDMIWPERVRRLSVMNSLQNVQQNRTSFQLRSLLLFSLADSHDDISISSLFSNGCRLLKVLDLQDAPLESFPAEIVNLYHLKYLSLKNTKVKSIPASIKKLQNLETLDLKHSHVTELPAEILELHRLRHLLVYRYEIESYAHFFSRNGFKLPGPIGCMQSLQKLCFIEADQGSQDLMVELGKLTQLRRLGIRKLKKEDGAALCSSIQKMTNLRSLSITAIEEDEIIDIQNIVKPPPYLRQLYLCGRLGKLPEWIPSLHNLVRVYLKWSRFLLERHCISRQRNFQV	800

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g1415	800	PRINTS	Disease resistance protein signature	614	630	-	-
	Prci10g1415	800	PRINTS	Disease resistance protein signature	264	278	-	-
	Prci10g1415	800	PRINTS	Disease resistance protein signature	360	374	-	-
	Prci10g1415	800	PRINTS	Disease resistance protein signature	184	199	-	-
	Prci10g1415	800	FunFam	Probable disease resistance protein At1g63360	413	502	-	-
	Prci10g1415	800	Gene3D	-	325	412	IPR042197	-
	Prci10g1415	800	Coils	Coil	24	54	-	-
	Prci10g1415	800	Gene3D	-	413	504	IPR036388	-
	Prci10g1415	800	Gene3D	-	149	317	IPR027417	-
	Prci10g1415	800	Pfam	NB-ARC domain	165	414	IPR002182	GO:0043531
	Prci10g1415	800	SUPERFAMILY	L domain-like	492	785	-	-
	Prci10g1415	800	CDD	RX-CC_like	2	127	IPR038005	-
	Prci10g1415	800	Gene3D	Ribonuclease Inhibitor	532	795	IPR032675	-
	Prci10g1415	800	PANTHER	DISEASE RESISTANCE PROTEIN RP	31	784	IPR044974	GO:0006952
	Prci10g1415	800	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	156	427	IPR027417	-
	Prci10g1415	800	Gene3D	-	6	112	-	-
	Prci10g1415	800	Pfam	Leucine rich repeat	572	628	IPR001611	GO:0005515
	Prci10g1415	800	FunFam	Probable disease resistance protein At1g61300	150	315	-	-
	Prci10g1415	800	Pfam	Rx N-terminal domain	7	90	IPR041118	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g1415	Prci-Chr10	9464457	9467164	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g1415	185	628	WRKY Transcription Factor Family	AT5G45050	21.133	3.77e-08	55.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g1415	K13457		-	gmx:100805529	1103.97