Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1414 ATGGCAGAGAGTCCGGTGTTGTTCTTACTGGACAAGCTAACATCTTTGCTGCAAGAAGAGGTGCAACTGCTTAAGGGTGTTCGCACAGAGGTTCAGTTCATCAAAGATGAACTTGAGCGCCTCAAGGCCATCTTAAGGATGGCTGATGCGTTGGAGGACAAAGACCCTGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTAGCTCACGACATGGAAGACGCCATTGACGAGTTCACCATTCGCCTTGTGAATCACCGTGGCCATGGCCACGATTCTGCTCTCAGAAGGTTTGCTTCATCCATCCAAGCTCTCAGAGCTCGGCACCGGATTGCTTCTAACTTACAAGAGATCAAAGCCAGAGTGGAAAACATCTCAAAGGGTCGTCGCAGCATAACTGAGGCCGGGTCAAGCTCCAGTCATTTTCACAAGTCGAGGCTTGATAGTCAAGGAGATGCACTTCTGCTCGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAGCAGCTGATTGACTTGCTTTTCCAGGAGGAGCAAGGAAAGGTGGTGATACCTATCTATGGAATGGGTGGGCTGGGGAAAACCACGGTGGCAAAGCAGGTCTATGATGACCCAAAATTGAAGAAGCGTTTCAAGATGCATGCTTGGGTCACAGTTTCCCAATCTTTCAAGATCAAGGAGCTCCTAAGAGACCTGGTTCAACAGCTTTATAAAGTTATAGGGAAACCAGCTCCTGCAGAAGTTGGCACAATGAAAAGTGACAATCTGAAGGAGGTGGTCAAGAGTCTGCTTCAACAAAGCAGGTATCTCATCGTCCTGGATGACATATGGCGGGTAAATGCTTGGGATGCTATCAAACTTGCTTTGCCTAACAACAACTATGGCAGTAGAATAATGCTCACCACAAGAAACAGAGAAGTAGCACTTTCTTGCTGCACTGAGTTGCAAGGCAAGACCTATAACCTGGAATTCTTACCTGAGCATGAAGCATGGTCTCTTTTCTGCAAGAAAACATTTCAGGGGAATGCATGTCCTCCACATTTGGAGGAGTCTTGCAAGACTATCTTGAAAAGATGTGGGGGATTGCCGCTAGCAATTGTGGCAATCAGTGGTGCTTTGGCCACAAAAGACAAGACCAACATAGAAGAATGGCTGGTTGTTAGCAGAAGTATTGCATCTGAAATTGAAAGCAGTGACAGAATGGAGGATATGAACAAAGTGCTTTCCCTAAGTTTCAACGAATTGCCTTACTATCTTAAATCCTGTTTGTTGTACCTGATCATCTTTCCAGAATTTTATGCCATTGAGCATATGAGGTTGATTCGCTTGTGGATAGCTGAAGGGTTTGTCACTGGAGAAGAAGGAAGGACGCTGGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACAGGAGCCTGATTCAAGTGGTAGAGAAAGGCAGTGATGGCAGGATGAAGACTTGTCGTGTTCACGACTTTCTACGGGACATCATCAATTTGAAGTCAAAAGATCAAAACTTTGCAACATTGGCCACCGACCAGGACATGATATGGCCAGAAAGAGTTCGTCGCCTGTCAGTAATGAATAGTTTACAGAACGTACAGCAAAACAGAACCTCATTCCAATTGCGTTCTCTGCTATTATTTTCTTTAGCAGATTCACATGATGATATCTCCATATCTTCACTATTCTCAAATGGTTGTAGGCTGCTCAAGGTACTAGATTTGCAAGATGCACCTTTGGAATCGTTTCCTGCTGAGATTGTCAACCTTTACCACCTGAAGTATCTAAGCCTGAAGAATACCAAGGTGAAAAGCATTCCAGCTTCCATTAAGAAGCTTCAAAACCTGGAAACATTAGATCTGAAACACTCCCATGTAACTGAATTGCCAGCTGAAATCCTGGAGCTGCATCGACTGCGCCACCTCCTGGTGTATCGTTATGAGATTGAATCCTATGCTCACTTCTTCTCAAGGAATGGTTTCAAGCTGCCAGGCCCAATAGGATGTATGCAATCTCTGCAAAAGCTTTGTTTCATAGAGGCAGACCAAGGAAGTCAAGACTTGATGGTTGAATTAGGCAAGCTGACTCAACTGAGGAGGCTGGGCATTAGAAAGCTGAAGAAAGAAGATGGGGCTGCTTTGTGCTCATCCATTCAGAAGATGACCAATCTCAGGTCTCTATCCATAACTGCAATCGAAGAAGATGAGATCATTGACATTCAGAACATTGTCAAGCCTCCTCCATACCTGAGACAATTGTACTTATGTGGACGTCTAGGGAAGTTACCTGAATGGATACCCTCTCTCCACAATCTGGTCAGAGTATACTTGAAATGGAGCAGGTTAGAGGAGGATCCTCTGGTGTATCTTCAAGATTTGCCCAATCTAATTCATCTCGAGTTTTTACAGGTTTTTGTTGGAGAGACATTGCATTTCAAGGCAGAGAAATTTCCAAGTTTGAAGCTTTTAGGCCTTGATGATTTAGATGGACTGAAATCCGTGATAGTGGAGGAAGGAGCAATGCCTAATCTGAAAAGATTAATTATCCAGCGATGTGGATCACTGAAGCAGGTACCTTCAGGCATAGAACATTTGAGTAAGCTAAAAGCAATTGACTTCTTTGATATGCCTGATGAATTGATCAATGCCCTGAGTCCAAATGGAGGTAAAGATAATTGGAGAGTAGCACACGTACCAGCGGTTTATTCGAACTACTGGAAATCTGGTACCTGGGATGTTTACTCATTGGACACTCTTGGAGAGAGAGACAGTTCTTCAAGTAATGTTGCAATGAAAAGTCATGAGATTCGTCCACTTTGGAAGGTTTAA 2838 0.4412 MAESPVLFLLDKLTSLLQEEVQLLKGVRTEVQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVNHRGHGHDSALRRFASSIQALRARHRIASNLQEIKARVENISKGRRSITEAGSSSSHFHKSRLDSQGDALLLEEADLVGIEKPKKQLIDLLFQEEQGKVVIPIYGMGGLGKTTVAKQVYDDPKLKKRFKMHAWVTVSQSFKIKELLRDLVQQLYKVIGKPAPAEVGTMKSDNLKEVVKSLLQQSRYLIVLDDIWRVNAWDAIKLALPNNNYGSRIMLTTRNREVALSCCTELQGKTYNLEFLPEHEAWSLFCKKTFQGNACPPHLEESCKTILKRCGGLPLAIVAISGALATKDKTNIEEWLVVSRSIASEIESSDRMEDMNKVLSLSFNELPYYLKSCLLYLIIFPEFYAIEHMRLIRLWIAEGFVTGEEGRTLEEVAESYLKELLNRSLIQVVEKGSDGRMKTCRVHDFLRDIINLKSKDQNFATLATDQDMIWPERVRRLSVMNSLQNVQQNRTSFQLRSLLLFSLADSHDDISISSLFSNGCRLLKVLDLQDAPLESFPAEIVNLYHLKYLSLKNTKVKSIPASIKKLQNLETLDLKHSHVTELPAEILELHRLRHLLVYRYEIESYAHFFSRNGFKLPGPIGCMQSLQKLCFIEADQGSQDLMVELGKLTQLRRLGIRKLKKEDGAALCSSIQKMTNLRSLSITAIEEDEIIDIQNIVKPPPYLRQLYLCGRLGKLPEWIPSLHNLVRVYLKWSRLEEDPLVYLQDLPNLIHLEFLQVFVGETLHFKAEKFPSLKLLGLDDLDGLKSVIVEEGAMPNLKRLIIQRCGSLKQVPSGIEHLSKLKAIDFFDMPDELINALSPNGGKDNWRVAHVPAVYSNYWKSGTWDVYSLDTLGERDSSSSNVAMKSHEIRPLWKV 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1414 945 Gene3D Ribonuclease Inhibitor 690 885 IPR032675 -
Prci10g1414 945 Pfam Rx N-terminal domain 7 90 IPR041118 -
Prci10g1414 945 Gene3D Ribonuclease Inhibitor 505 683 IPR032675 -
Prci10g1414 945 FunFam Probable disease resistance protein At1g61300 150 315 - -
Prci10g1414 945 Coils Coil 24 54 - -
Prci10g1414 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 427 IPR027417 -
Prci10g1414 945 FunFam Probable disease resistance protein At1g63360 413 502 - -
Prci10g1414 945 Gene3D - 6 112 - -
Prci10g1414 945 Pfam NB-ARC domain 165 414 IPR002182 GO:0043531
Prci10g1414 945 PANTHER DISEASE RESISTANCE PROTEIN RP 31 859 IPR044974 GO:0006952
Prci10g1414 945 CDD RX-CC_like 2 127 IPR038005 -
Prci10g1414 945 Gene3D - 149 317 IPR027417 -
Prci10g1414 945 Pfam Leucine rich repeat 572 628 IPR001611 GO:0005515
Prci10g1414 945 SUPERFAMILY L domain-like 492 882 - -
Prci10g1414 945 Gene3D - 325 412 IPR042197 -
Prci10g1414 945 Gene3D - 413 504 IPR036388 -
Prci10g1414 945 PRINTS Disease resistance protein signature 184 199 - -
Prci10g1414 945 PRINTS Disease resistance protein signature 264 278 - -
Prci10g1414 945 PRINTS Disease resistance protein signature 360 374 - -
Prci10g1414 945 PRINTS Disease resistance protein signature 614 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1414 Prci-Chr10 9464457 9468483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1414 185 628 WRKY Transcription Factor Family AT5G45050 21.133 2.60e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1414 K13457 - gmx:100305458 1345.87