Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1412 ATGGCAGCTTGCACAGTGTACACAACACAATCTCTCAACACAAATTGCTCCTTCACAACACCATCAAAAACCCACCTGGGTTTTCACCAAAAACAGGTTCTTTTCTACAGAAGCAGAAGCAGAAACAGAAGCAATAGCAGCAGCAGACCATGGGTGATAACATGCGCTGCAGGTAACTCACAGACAGTGGTGATTGGTCTAGCAGCAGACTCAGGCTGTGGCAAGAGTACTTTCATGAGGAGGCTTACCAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAAGGAGGGAATCCAGATTCCAACACACTGATAAGTGACACAACCACTGTGATATGTTTGGATGATTATCACTCACTTGACAGAACAGGAAGGAAGGAGAAGGGAGTCACAGCTCTTGACCCAAGAGCCAATGATTTTGATCTCATGTATGAACAAGTTAAGGCGCTCAAGGAAGGTATTGCTGTGGATAAACCCATTTACAACCACGTCACTGGTCTCTTGGACCCACCTGAGCTCATCAAACCCCCCAAGATCTTGGTCATCGAAGGCTTGCATCCAATGTTTGATGCTCGGGTGAGAGAACTATTGGACTTTAGCATCTACTTGGACATCAGCAATGAGGTGAAATTCGCCTGGAAAATTCAGAGAGACATGGCAGAACGTGGGCACAGCCTTGAAAGTATCAAAGCTAGCATTGAAGCAAGAAAACCCGATTTCGAGGCTTTTATTGATCCTCAGAAGCAATATGCAGATGCAGTGATTGAAGTGTTACCAACACAGCTAATACCAGACGACAATGAAGGGAAGATATTGAGAGTGAGATTGATACAGAAAGAAGGGGTTAAGCATTTCAGCCCAGTTTACTTGTTTGATGAAGGCTCTACCATTTCCTGGATTCCTTGTGGAAGGAAGCTTACTTGCTCTTACCCTGGCATCAAATTTTTCTATGGCCCTGAAACTTATTATGGAAATGAGGTATCAGTTGTAGAGATGGATGGGCAATTTGACAGACTAGATGAGCTAATATACGTTGAGAGCCATCTAAGCAACCTGTCAACCAAGTTCTATGGAGAAGTTACACAACAAATGTTGAAGCATGCTGAATTCCCTGGCAGCAGCAACGGCACCGGTCTCTTCCAAACCATAGTTGGTTTGAAGATCAGAGATCTGTTTGAGCAGATTGTAGCAAGCAGAACTCAGACACCAGTAAAAGCAGCTAAGAGTTAA 1227 0.4442 MAACTVYTTQSLNTNCSFTTPSKTHLGFHQKQVLFYRSRSRNRSNSSSRPWVITCAAGNSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGIAVDKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDARVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAFIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYYGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHAEFPGSSNGTGLFQTIVGLKIRDLFEQIVASRTQTPVKAAKS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1412 408 PANTHER URIDINE KINASE 46 304 - -
Prci10g1412 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 333 IPR027417 -
Prci10g1412 408 PRINTS Phosphoribulokinase family signature 231 254 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci10g1412 408 PRINTS Phosphoribulokinase family signature 69 86 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci10g1412 408 PRINTS Phosphoribulokinase family signature 213 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci10g1412 408 PRINTS Phosphoribulokinase family signature 178 196 IPR006082 GO:0005524|GO:0005975|GO:0008974
Prci10g1412 408 CDD PRK 64 353 - -
Prci10g1412 408 FunFam Phosphoribulokinase 59 289 - -
Prci10g1412 408 Pfam Phosphoribulokinase / Uridine kinase family 64 262 IPR006083 GO:0005524|GO:0016301
Prci10g1412 408 Gene3D - 59 293 IPR027417 -
Prci10g1412 408 ProSitePatterns Phosphoribulokinase signature. 213 226 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1412 Prci-Chr10 9441866 9445261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1412 22 254 PRT Gene Family AT1G55810 27.083 1.11e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1412 K00855 - gmx:100777515 744.962