LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g1412	ATGGCAGCTTGCACAGTGTACACAACACAATCTCTCAACACAAATTGCTCCTTCACAACACCATCAAAAACCCACCTGGGTTTTCACCAAAAACAGGTTCTTTTCTACAGAAGCAGAAGCAGAAACAGAAGCAATAGCAGCAGCAGACCATGGGTGATAACATGCGCTGCAGGTAACTCACAGACAGTGGTGATTGGTCTAGCAGCAGACTCAGGCTGTGGCAAGAGTACTTTCATGAGGAGGCTTACCAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAAGGAGGGAATCCAGATTCCAACACACTGATAAGTGACACAACCACTGTGATATGTTTGGATGATTATCACTCACTTGACAGAACAGGAAGGAAGGAGAAGGGAGTCACAGCTCTTGACCCAAGAGCCAATGATTTTGATCTCATGTATGAACAAGTTAAGGCGCTCAAGGAAGGTATTGCTGTGGATAAACCCATTTACAACCACGTCACTGGTCTCTTGGACCCACCTGAGCTCATCAAACCCCCCAAGATCTTGGTCATCGAAGGCTTGCATCCAATGTTTGATGCTCGGGTGAGAGAACTATTGGACTTTAGCATCTACTTGGACATCAGCAATGAGGTGAAATTCGCCTGGAAAATTCAGAGAGACATGGCAGAACGTGGGCACAGCCTTGAAAGTATCAAAGCTAGCATTGAAGCAAGAAAACCCGATTTCGAGGCTTTTATTGATCCTCAGAAGCAATATGCAGATGCAGTGATTGAAGTGTTACCAACACAGCTAATACCAGACGACAATGAAGGGAAGATATTGAGAGTGAGATTGATACAGAAAGAAGGGGTTAAGCATTTCAGCCCAGTTTACTTGTTTGATGAAGGCTCTACCATTTCCTGGATTCCTTGTGGAAGGAAGCTTACTTGCTCTTACCCTGGCATCAAATTTTTCTATGGCCCTGAAACTTATTATGGAAATGAGGTATCAGTTGTAGAGATGGATGGGCAATTTGACAGACTAGATGAGCTAATATACGTTGAGAGCCATCTAAGCAACCTGTCAACCAAGTTCTATGGAGAAGTTACACAACAAATGTTGAAGCATGCTGAATTCCCTGGCAGCAGCAACGGCACCGGTCTCTTCCAAACCATAGTTGGTTTGAAGATCAGAGATCTGTTTGAGCAGATTGTAGCAAGCAGAACTCAGACACCAGTAAAAGCAGCTAAGAGTTAA	1227	0.4442	MAACTVYTTQSLNTNCSFTTPSKTHLGFHQKQVLFYRSRSRNRSNSSSRPWVITCAAGNSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGIAVDKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDARVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAFIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYYGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHAEFPGSSNGTGLFQTIVGLKIRDLFEQIVASRTQTPVKAAKS	408

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g1412	408	PANTHER	URIDINE KINASE	46	304	-	-
	Prci10g1412	408	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	61	333	IPR027417	-
	Prci10g1412	408	PRINTS	Phosphoribulokinase family signature	231	254	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Prci10g1412	408	PRINTS	Phosphoribulokinase family signature	69	86	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Prci10g1412	408	PRINTS	Phosphoribulokinase family signature	213	230	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Prci10g1412	408	PRINTS	Phosphoribulokinase family signature	178	196	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Prci10g1412	408	CDD	PRK	64	353	-	-
	Prci10g1412	408	FunFam	Phosphoribulokinase	59	289	-	-
	Prci10g1412	408	Pfam	Phosphoribulokinase / Uridine kinase family	64	262	IPR006083	GO:0005524\|GO:0016301
	Prci10g1412	408	Gene3D	-	59	293	IPR027417	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g1412	Prci-Chr10	9441866	9445261	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g1412	22	254	PRT Gene Family	AT1G55810	27.083	1.11e-17	82.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g1412	K00855		-	gmx:100777515	744.962

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