LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g1407	ATGCTTAGCCACGAAAACTCATTGATGTATCTTCACTTTCTCATCCTAGTGATTGTTTCTTCCCTTTTCTTCAGCTGCATCGGCGTGTTTACTGAAACCAACACTCTGAATCAATCCGACTCACTCAACTTCACCAGCCTCTTGGTTTCCAACAACAAGAATTTCACCTTAGGATTCGTCAAACCTGTTACCTATAGAAACAAAACTTACTTAGCAATTTGGAATTCCAAGTACAGGTCACCTTCATCTCCAGTTTGGACAGCCAACAGAGACAACCCAATCACTAATGGTTCTGCAACTCTGTTCATAGACAACACCGGAAAGTTTGTGATCAATCAAACTCATGGGGACCCAATTCAACTGTGCCCTGGCCAAACCACCACAAGCAACAACACAAACACAAAGGCTGTCTTGCTGGACAATGGGAATCTCGTGCTGACAGAAGTGAATTCCGATGGATCTGTCGGAAGAATCTTGTGGCAGAGCTTTGATTGTCCCACGGACACTCTGTTGCCTGGCATGAGACTAGGTATGAATCATAGAACAGGAAGGAACTGGTCTCTCACCTCATGGCTGGCTTCTAATGATCCATCTTCAGGAGCTTTTACACTCGAATGGGACCCTCATGGCTTAGAGTTGATCCTTCGACGTCGAGGGGTTGTTTTCTGGACCAGTGGGGCCTTGAGAAACATCAGCGACGGCGATCTTGATGCTGGAATGACCTTCGGAAACATAGGCCAAACCTACTATCATATACAATCTTATAAGATGATGTATACCAGAACTTCAGATGAAGAGTTCTTCAACTATTCGTTGAAACAAGACCCCAAGGATCCTGTGGTTCATGAAAGCATAGAATGGAGCATAGATTACGATGGTACTTTCTGGTTTGAGAATGTGGGTGTCCCGTTAAGGTATTATTGTTATGGGTACATGACAGATGACGATGAAGGATGTGCAGAATGGGAACAACCTCAGTGTAGGAGTTACAATACAACGTTTCAGTTGTTGTCTGGGTCCTTTGTGAACAAGAGTGATGGAAAATTCATTGATGGTCATCAGGAAAGCGTTGGTCCTGCTGATTGTAGAGTTAGTTGCTGGAATGAGTGCGATTGTGCGGCATATCAGAAAATGGGCACGTTGCGTTGCGTCAAGTATGACCAAGAAGCAGAGTTTCGACCTGATCCATCTGGGGATTCGCCACAGTTTTATGTTATCCAACAACCACATAATAATACAGAAGCACAAAGGAACAATAAGAAATGGATTGCAATTTCAGTTCCTATCGCAATATTGTTGTTGTTAGCGTTTGTCACTGTTATCATCTTTTATTGGAGATGGAAAACAAAAGGAAGAAAGGAGGACCCACTACATGAATTGATGACAGCAACTGATAATTCACACAATCTTGATGAGCTAGGATATGATAATGCTTTTGCTCAGCATTTGAAAATGTTCAGCTTTATGTCTATTGTTGAAGCCACAGATAACTTTTCTCCACAAAATAAGCTTGGACAAGGTGGTTTTGGCCCTGTGTACAAGGGAAAATTACCCGAGGGGTTAAAAATTGCAGTGAAAAGGCTATCAAAAAGTTCAGGACAAGGATTAGTGGAGTTTAAGAATGAGTTAATACTCATAGCAAAGCTACAACACATGAATCTAGTTCGTTTGCTTGGATGCTGCATGCAACCTGAGGAGATGATGTTGATTTACGAATACATGCCTAACCGAAGCTTGGACTGCTTTCTCTTTGATGCATCGAAGAGGAATGTGTTAAATTGGCAAATGAGAGTGATGATCATTGAAGGGATTTCACAAGGACTACTTTACCTTCACCAACATTCAAGATTAAAGATCATACACAGAGATCTTAAGGCTAGTAATATATTACTTGATGCGGATATGAATCCTAAAATTTCTGACTTTGGAATGGCAAGAATTTTCAAGCAAAATGAACTTATTGCCAACACTAACAAGATTGTTGGGACATATGGATACATGTCTCCTGAATATGCAATGGATGGATTATTCTCTATAAAATCAGATATTTTTAGTCTTGGCGTCATGATCCTTGAAATTTTAAGTGGCAAGAGGAATAACAGCTTTTATGATGTTAATAAGCATATGAACCTAGTACAATATGCTTGGGATTTGTGGCAAAATGGAGTTGGCCTGGACCTAATGGATCCAATGTTAACTGATTCATGTTCCAGGCAGCAATTTCTTAGATTTATTCAAATAGGTCTTTTATGCGTAGAAGAATCTCCAGCAGATAGACCAACTACTCGAGAAGTTATTTCTATGATCACAAATGAAAACACTATTTTGCCGTTAGTGAAGAAACCTGCATTTACAAATTTAAATAATGTTGCCGATGCAAATGGTCAAAGCAATGACTTGGAATACCATTCCATCAACAATGTGTCAATGTCTACCATGAATGGGAGATAG	2451	0.4035	MLSHENSLMYLHFLILVIVSSLFFSCIGVFTETNTLNQSDSLNFTSLLVSNNKNFTLGFVKPVTYRNKTYLAIWNSKYRSPSSPVWTANRDNPITNGSATLFIDNTGKFVINQTHGDPIQLCPGQTTTSNNTNTKAVLLDNGNLVLTEVNSDGSVGRILWQSFDCPTDTLLPGMRLGMNHRTGRNWSLTSWLASNDPSSGAFTLEWDPHGLELILRRRGVVFWTSGALRNISDGDLDAGMTFGNIGQTYYHIQSYKMMYTRTSDEEFFNYSLKQDPKDPVVHESIEWSIDYDGTFWFENVGVPLRYYCYGYMTDDDEGCAEWEQPQCRSYNTTFQLLSGSFVNKSDGKFIDGHQESVGPADCRVSCWNECDCAAYQKMGTLRCVKYDQEAEFRPDPSGDSPQFYVIQQPHNNTEAQRNNKKWIAISVPIAILLLLAFVTVIIFYWRWKTKGRKEDPLHELMTATDNSHNLDELGYDNAFAQHLKMFSFMSIVEATDNFSPQNKLGQGGFGPVYKGKLPEGLKIAVKRLSKSSGQGLVEFKNELILIAKLQHMNLVRLLGCCMQPEEMMLIYEYMPNRSLDCFLFDASKRNVLNWQMRVMIIEGISQGLLYLHQHSRLKIIHRDLKASNILLDADMNPKISDFGMARIFKQNELIANTNKIVGTYGYMSPEYAMDGLFSIKSDIFSLGVMILEILSGKRNNSFYDVNKHMNLVQYAWDLWQNGVGLDLMDPMLTDSCSRQQFLRFIQIGLLCVEESPADRPTTREVISMITNENTILPLVKKPAFTNLNNVADANGQSNDLEYHSINNVSMSTMNGR	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g1407	816	ProSiteProfiles	Bulb-type lectin domain profile.	33	159	IPR001480	-
	Prci10g1407	816	SUPERFAMILY	alpha-D-mannose-specific plant lectins	84	197	IPR036426	-
	Prci10g1407	816	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	619	631	IPR008271	GO:0004672\|GO:0006468
	Prci10g1407	816	SUPERFAMILY	Protein kinase-like (PK-like)	481	785	IPR011009	-
	Prci10g1407	816	SMART	blect_4	33	166	IPR001480	-
	Prci10g1407	816	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	574	777	-	-
	Prci10g1407	816	Gene3D	-	29	164	IPR036426	-
	Prci10g1407	816	Gene3D	Transferase(Phosphotransferase) domain 1	574	778	-	-
	Prci10g1407	816	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230	463	573	-	-
	Prci10g1407	816	SMART	serkin_6	498	750	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1407	816	ProSiteProfiles	Protein kinase domain profile.	498	776	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1407	816	Pfam	Protein kinase domain	501	766	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1407	816	Pfam	D-mannose binding lectin	84	191	IPR001480	-
	Prci10g1407	816	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	127	792	-	-
	Prci10g1407	816	CDD	STKc_IRAK	504	771	-	-
	Prci10g1407	816	Gene3D	Phosphorylase Kinase; domain 1	456	573	-	-
	Prci10g1407	816	PIRSF	SRK	4	299	IPR024171	GO:0004674
	Prci10g1407	816	PIRSF	SRK	309	816	IPR024171	GO:0004674

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g1407	Prci-Chr10	9390924	9395147	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g1407	427	784	Receptor kinase-like Gene Family	AT4G23230	51.397	9.68e-122	379

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci10g1407		Pkinase	4.4e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g1407	-		-	pcin:129322789	1683.69