Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1406 ATGCTTAGCCACGAAAACTCATTGATGTATCTTCACTTTCTCATCCTAGTGATTGTTTCTTCCCTTTTCTTCAGCTGCATCGGCGTGTTTACTGAAACCAACACTCTGAATCAATCCGACTCACTCAACTTCACCAGCCTCTTGGTTTCCAACAACAAGAATTTCACCTTAGGATTCGTCAAACCTGTTACCTATAGAAACAAAACTTACTTAGCAATTTGGAATTCCAAGTACAGGTCACCTTCATCTCCAGTTTGGACAGCCAACAGAGACAACCCAATCACTAATGGTTCTGCAACTCTGTTCATAGACAACACCGGAAAGTTTGTGATCAATCAAACTCATGGGGACCCAATTCAACTGTGCCCTGGCCAAACCACCACAAGCAACAACACAAACACAAAGGCTGTCTTGCTGGACAATGGGAATCTCGTGCTGACAGAAGTGAATTCCGATGGATCTGTCGGAAGAATCTTGTGGCAGAGCTTTGATTGTCCCACGGACACTCTGTTGCCTGGCATGAGACTAGGTATGAATCATAGAACAGGAAGGAACTGGTCTCTCACCTCATGGCTGGCTTCTAATGATCCATCTTCAGGAGCTTTTACACTCGAATGGGACCCTCATGGCTTAGAGTTGATCCTTCGACGTCGAGGGGTTGTTTTCTGGACCAGTGGGGCCTTGAGAAACATCAGCGACGGCGATCTTGATGCTGGAATGACCTTCGGAAACATAGGCCAAACCTACTATCATATACAATCTTATAAGATGATGTATACCAGAACTTCAGATGAAGAGTTCTTCAACTATTCGTTGAAACAAGACCCCAAGGATCCTGTGGTTCATGAAAGCATAGAATGGAGCATAGATTACGATGGTACTTTCTGGTTTGAGAATGTGGGTGTCCCGTTAAGGTATTATTGTTATGGGTACATGACAGATGACGATGAAGGATGTGCAGAATGGGAACAACCTCAGTGTAGGAGTTACAATACAACGTTTCAGTTGTTGTCTGGGTCCTTTGTGAACAAGAGTGATGGAAAATTCATTGATGGTCATCAGGAAAGCGTTGGTCCTGCTGATTGTAGAGTTAGTTGCTGGAATGAGTGCGATTGTGCGGCATATCAGAAAATGGGCACGTTGCGTTGCGTCAAGTATGACCAAGAAGCAGAGTTTCGACCTGATCCATCTGGGGATTCGCCACAGTTTTATGTTATCCAACAACCACATAATAGAAGAAAGGAGGACCCACTACATGAATTGATGACAGCAACTGATAATTCACACAATCTTGATGAGCTAGGATATGATAATGCTTTTGCTCAGCATTTGAAAATGTTCAGCTTTATGTCTATTGTTGAAGCCACAGATAACTTTTCTCCACAAAATAAGCTTGGACAAGGTGGTTTTGGCCCTGTGTACAAGGGAAAATTACCCGAGGGGTTAAAAATTGCAGTGAAAAGGCTATCAAAAAGTTCAGGACAAGGATTAGTGGAGTTTAAGAATGAGTTAATACTCATAGCAAAGCTACAACACATGAATCTAGTTCGTTTGCTTGGATGCTGCATGCAACCTGAGGAGATGATGTTGATTTACGAATACATGCCTAACCGAAGCTTGGACTGCTTTCTCTTTGATGCATCGAAGAGGAATGTGTTAAATTGGCAAATGAGAGTGATGATCATTGAAGGGATTTCACAAGGACTACTTTACCTTCACCAACATTCAAGATTAAAGATCATACACAGAGATCTTAAGGCTAGTAATATATTACTTGATGCGGATATGAATCCTAAAATTTCTGACTTTGGAATGGCAAGAATTTTCAAGCAAAATGAACTTATTGCCAACACTAACAAGATTGTTGGGACATATGGATACATGTCTCCTGAATATGCAATGGATGGATTATTCTCTATAAAATCAGATATTTTTAGTCTTGGCGTCATGATCCTTGAAATTTTAAGTGGCAAGAGGAATAACAGCTTTTATGATGTTAATAAGCATATGAACCTAGTACAATATGCTTGGGATTTGTGGCAAAATGGAGTTGGCCTGGACCTAATGGATCCAATGTTAACTGATTCATGTTCCAGGCAGCAATTTCTTAGATTTATTCAAATAGGTCTTTTATGCGTAGAAGAATCTCCAGCAGATAGACCAACTACTCGAGAAGTTATTTCTATGATCACAAATGAAAACACTATTTTGCCGTTAGTGAAGAAACCTGCATTTACAAATTTAAATAATGTTGCCGATGCAAATGGTCAAAGCAATGACTTGGAATACCATTCCATCAACAATGTGTCAATGTCTACCATGAATGGGAGATAG 2334 0.407 MLSHENSLMYLHFLILVIVSSLFFSCIGVFTETNTLNQSDSLNFTSLLVSNNKNFTLGFVKPVTYRNKTYLAIWNSKYRSPSSPVWTANRDNPITNGSATLFIDNTGKFVINQTHGDPIQLCPGQTTTSNNTNTKAVLLDNGNLVLTEVNSDGSVGRILWQSFDCPTDTLLPGMRLGMNHRTGRNWSLTSWLASNDPSSGAFTLEWDPHGLELILRRRGVVFWTSGALRNISDGDLDAGMTFGNIGQTYYHIQSYKMMYTRTSDEEFFNYSLKQDPKDPVVHESIEWSIDYDGTFWFENVGVPLRYYCYGYMTDDDEGCAEWEQPQCRSYNTTFQLLSGSFVNKSDGKFIDGHQESVGPADCRVSCWNECDCAAYQKMGTLRCVKYDQEAEFRPDPSGDSPQFYVIQQPHNRRKEDPLHELMTATDNSHNLDELGYDNAFAQHLKMFSFMSIVEATDNFSPQNKLGQGGFGPVYKGKLPEGLKIAVKRLSKSSGQGLVEFKNELILIAKLQHMNLVRLLGCCMQPEEMMLIYEYMPNRSLDCFLFDASKRNVLNWQMRVMIIEGISQGLLYLHQHSRLKIIHRDLKASNILLDADMNPKISDFGMARIFKQNELIANTNKIVGTYGYMSPEYAMDGLFSIKSDIFSLGVMILEILSGKRNNSFYDVNKHMNLVQYAWDLWQNGVGLDLMDPMLTDSCSRQQFLRFIQIGLLCVEESPADRPTTREVISMITNENTILPLVKKPAFTNLNNVADANGQSNDLEYHSINNVSMSTMNGR 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1406 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Prci10g1406 777 ProSiteProfiles Bulb-type lectin domain profile. 33 159 IPR001480 -
Prci10g1406 777 CDD STKc_IRAK 465 732 - -
Prci10g1406 777 PIRSF SRK 4 299 IPR024171 GO:0004674
Prci10g1406 777 PIRSF SRK 402 777 IPR024171 GO:0004674
Prci10g1406 777 PIRSF SRK 309 432 IPR024171 GO:0004674
Prci10g1406 777 SMART blect_4 33 166 IPR001480 -
Prci10g1406 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 535 738 - -
Prci10g1406 777 Gene3D Transferase(Phosphotransferase) domain 1 535 739 - -
Prci10g1406 777 SUPERFAMILY Protein kinase-like (PK-like) 442 746 IPR011009 -
Prci10g1406 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 197 IPR036426 -
Prci10g1406 777 Pfam Protein kinase domain 462 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1406 777 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 127 753 - -
Prci10g1406 777 Gene3D - 29 164 IPR036426 -
Prci10g1406 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 423 534 - -
Prci10g1406 777 Pfam D-mannose binding lectin 84 191 IPR001480 -
Prci10g1406 777 SMART serkin_6 459 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1406 777 ProSiteProfiles Protein kinase domain profile. 459 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1406 777 Gene3D Phosphorylase Kinase; domain 1 418 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1406 Prci-Chr10 9390924 9395147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1406 447 745 Receptor kinase-like Gene Family AT4G23250 59.333 7.97e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci10g1406 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1406 - - pcin:129322789 1583.54