Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1392 ATGAGCATTCCGCCGGCCATGTGGACGGGACTCCAGCCGTCGCCGTTCACGCTAGCGCAGTGGCAGGAGCTCGAACACCAAGCTCTCATTTTTAAGTATCTCAAAGCCGGATTATCCGTTCCGCCCGACCTTCTCGCTCCGATTCACAAGAGTCTTCAATTGATGCCGGTTCCTCATTCAGCTCTGGGTTATGGCTCCTATTTCGGGAAGAAGATAGACCCAGAACCGGGAAGGTGCCGGAGAACCGACGGCAAGAAATGGAGGTGTTCGAGAGACGCTCACCCAGACTCAAAGTACTGTGAGCGACACATGATTCGCCGTCGTCATCGTTCAAGAAAGCCTGTGGAAGCATCACAAGCTGCTCATCCTCCTGCTCAGTCTTCGGAGGTTAGTGGTGGGACCAGAAGTGGTTGTGGAAAATCATTTGCCAGCCTGCCTCTTCACACTAATGGTACTCGTGAGGGTATAAACCTTGGAAACAACTTATCACAGCTTCAGATGGAGTCTCTTCCCAGTGAGATTAACAGTAAAGAGTACAGGTTTGGACTGGAATCTGAAGTAGATGAGCATGACTTCTTTCAGAAAGACCTGGGAAGTGTGAGGTATCTTGGTTTTGACCCTTCCTCGGACAGCATGTGGTCTCAGCTGTCTCACATTTCCTCAAACACTGTCTCTGAATCAAGTGATAGTTCTGTCATGGCTAGCAACTGCTTTCAACTGCAAGCAATGCCGGATGCTGAGCCGCATTCAAACATCGATGCCGTGACATCCAAGCAACTCGTCTACAGTGGCCAGTTAGGTTCAACTGGTTGCTTGAAACAGGACTACCAGTCCCCTCAAACTCTCATCAGTACTTGGCCATGGAAGAAGGAGCTGGGCTCACCTGTGATGGATTATAGACCCAATAAGGATTCGACAGGCAACCCGGATGTCAATGTTGATTGCTGTGGATCTCTGTAA 960 0.5 MSIPPAMWTGLQPSPFTLAQWQELEHQALIFKYLKAGLSVPPDLLAPIHKSLQLMPVPHSALGYGSYFGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRHRSRKPVEASQAAHPPAQSSEVSGGTRSGCGKSFASLPLHTNGTREGINLGNNLSQLQMESLPSEINSKEYRFGLESEVDEHDFFQKDLGSVRYLGFDPSSDSMWSQLSHISSNTVSESSDSSVMASNCFQLQAMPDAEPHSNIDAVTSKQLVYSGQLGSTGCLKQDYQSPQTLISTWPWKKELGSPVMDYRPNKDSTGNPDVNVDCCGSL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1392 319 PANTHER GROWTH-REGULATING FACTOR 5 14 215 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci10g1392 319 MobiDBLite consensus disorder prediction 121 136 - -
Prci10g1392 319 MobiDBLite consensus disorder prediction 100 136 - -
Prci10g1392 319 ProSiteProfiles QLQ domain profile. 15 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci10g1392 319 Pfam QLQ 15 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci10g1392 319 Pfam WRC 74 116 IPR014977 -
Prci10g1392 319 ProSiteProfiles WRC domain profile. 73 117 IPR014977 -
Prci10g1392 319 SMART QLQ_2 14 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1392 Prci-Chr10 9285933 9288523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1392 15 119 GRF Transcription Factor Family AT3G13960 60.714 4.24e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci10g1392 WRC 7.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1392 - - pcin:129310568 376.326