Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1390 ATGTTTACGTGCATAGCATGTACGAAGCAAACGACGGATGACAGGGAAGAAGAAGAAGGTGGACGTGACAGTGGCACGCCCAGTACGAAAGAGGCCGTCAAAGGCCTGACGGCGCAGTTAAAAGATATGTTCATTAAGCAATGCAAACCCTGCACAGGGTCCCCTAGCTACAAGAAAGGGCAGAGACCTTTTCCAGACTTTGATACTATATCTGAAGGGGTTCCATATCCCTACATTGGAGGTGCAAGTTCAAGTTCAACCCCTGCATGGGACTTTACAAGCTCCCGTTACCCCGGTGGTAGATCTGACCCCAGATTTGTTGGGGCCGGACGCGACTCAACAGTATCAGCACAATCATGTGATGTAGTTTTAGAGGACGAGGACGAACCCAAGGAGTGGATGGCTCAGGTGGAACCTGGTGTTCACATCACCTTTGTGTCTCTTCCTGATGGAGGGAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCAATAAATGGCAAGCTCAGAGATGGTGGGGTGAGAATTACGACCGGATCATGGAGCTCTATAACGTCCAAAGATTCAATCGACAAGCTTTTCAAACTCCCTCGAGGGCTGATGATGAGGCAAGAGATTCTTCTTATACAAGATTAGGATCTGCACGAGAGAGCAAGGAGTGGACACCGCGGCATCACTATAGACCCTCGGGATACAGAGGACACTTCCCTTCTGACCATTTTGATCAGGCTGTTGGCCACCAGTTCCAAGCGGGATCATCCATGGAACCACCTCGCCCAACTACTGATTCTGTAAATGAACCTTCTGTCAGTAATGCCGGTGACATGGAGGCAGAATGGATTGAGGAAGACGAGCCCGGGGTCTACATTACAATCCGACAATTAGCTGACGGTACCAGGGAGCTCCGACGTGTCAGGTTCAGTCGGGAAAGATTTGGAGAAGTAAATGCAAAGACATGGTGGGAAGAGAACAGGGAGAGAATACAAGAACAGTACCTTTGA 1005 0.4915 MFTCIACTKQTTDDREEEEGGRDSGTPSTKEAVKGLTAQLKDMFIKQCKPCTGSPSYKKGQRPFPDFDTISEGVPYPYIGGASSSSTPAWDFTSSRYPGGRSDPRFVGAGRDSTVSAQSCDVVLEDEDEPKEWMAQVEPGVHITFVSLPDGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQAFQTPSRADDEARDSSYTRLGSARESKEWTPRHHYRPSGYRGHFPSDHFDQAVGHQFQAGSSMEPPRPTTDSVNEPSVSNAGDMEAEWIEEDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQEQYL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1390 334 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 334 IPR044532 -
Prci10g1390 334 Pfam Transcription factor BRX N-terminal domain 26 51 IPR027988 -
Prci10g1390 334 MobiDBLite consensus disorder prediction 1 33 - -
Prci10g1390 334 MobiDBLite consensus disorder prediction 251 272 - -
Prci10g1390 334 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Prci10g1390 334 Pfam Transcription factor regulating root and shoot growth via Pin3 278 333 IPR013591 -
Prci10g1390 334 ProSiteProfiles BRX domain profile. 279 334 IPR013591 -
Prci10g1390 334 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
Prci10g1390 334 MobiDBLite consensus disorder prediction 196 225 - -
Prci10g1390 334 MobiDBLite consensus disorder prediction 199 225 - -
Prci10g1390 334 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1390 Prci-Chr10 9258960 9266298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1390 1 334 Major Intrinsic Protein MIP AT1G31880 66.762 1.18e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1390 - - gmx:100785003 531.946