Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1380 ATGGATAAACCAAAGACCGATCAGGTCGTCCTCTTCATCGACCACCTCAACACTGGTCATCCCTCCATGGAAACTCATCAGAACAACATAAACAATGACACCACCACCACCACCAACAAGCCCAAACTCACTTCCAGAGTCAAGACGCTCAATCGCCTGAGCTTCTCCAAACCCAAATCTCGCATCCAAGAACACTACCACCCACTCTACACCCAATTCACCGTCTCCGAAGAAGCCGAAGACATTGCCGGCCGGTATTCTTCCACCGACGACGAATGGAACGAAGACGACGATGAAGAAGAAGATCAGGTGGAGGAGGACGGCCCAAAGTCCCACGAGAAAACCAAACGTCGTCGTCGGAAGATTCAGTGGAAGCGCGTGGTTGAGTGGGCGTTGTTCCTCATCATATTAACCAGCTTGGTCTCTTGTCTCACCATTCCCTCCATCAAAACGAAGTATTCGTGGGGTTTGGAGATTTGGAAATGGTGCTTGATGGGGATGGTAACCTTCAGTGGACGCTTAGTCTCTGGTTGGCTCGTAGCTGTGTCCGTATTCATCATAGAGAGAAACTTCATGCTCAGAGAAAAGGTCTTATACTTCATCTACGGTCTCAGGAAAAGCATCAGAAACTGCATATGGCTAGGCCTCGTGTTATTCTCGTACTGGACCGTCGTCTTCGACAACGTCCAGAAGAAAAATCACAAGTTCCTCAACAAGGTGTTTCAGGCCCTTGTGGCCGTCCTCGTCGGAGCCATAATCTGGCTCGTCAAGATTGTGCTGGTGAAAATGCTAGCCTCATCGTTCCACGTCGCGACCTACTTCGACAGAATGAAAGAGAGCGTGTTCCATCACTACATACTGGACACACTCTCTGGGCCTCCCTTGGAGGAGAACGATGAAACGACGTCGCAGCATACTCTGACGGGGTCCAAGTCCATGCCGGCGAACTGGAAGGGAAGGAATAAGGCGATAAAGGAGGCGAAGAACTTGCACAAGTCGAAGAAGTTTGGGTCGAGGAAGATTGATATGGACAAGCTGAGAGAGCTGAGTATGAAGAGCACGGCGTCGGCGTGGAGTGTGAAGAGACTGGTGAACTACGTGAAGTCGTCGGGCTTGTCGACGATTTCCCGGACGATCGACGATTTCGGGAACGCCGAGTCTGAGATTTGCAGCGAGTGGGAAGCTCGGAATTGTGCTCAGAGGATTTTCAAGAACGTTGCTAAACCTGGTGCCAAGTATATTGAGGAGGAGGATCTCATGAGATTTTTGAAGAGAGTTGAGGTTCATACTATATTCCCACTCTTTGAAGGTGCCCTCGAAACTGGAAAGATCTCCAGGTCTTCCTTTAGAAATTGGGTGATTCGAGCTTATTATGAAAGAAAGGCTCTAGCACAATCACTGAATGACACAAAAACAGCAGTGCAACAGCTTCACAAGATAGCCAGCTCAATAGTGACAGTGATAATAATCGTAGTTCTCCTTTTGGTGATGGAGCTGGCTACAATCAAAGTGATACTTTTCGTCATTACACAGATAGTTCTGGTCGGGGTTGCCTTCCAAGGTACCTGCAAGACTGTGTTGGAGGCCATCATCTTCGTCTTTGTCATGCACCCTTTTGACATTGGAGATCGCTGCGTCATTGATGATGTTCACATGACTGTGGAAGAGATGAATATCTTGACGACTGTGTTTCTTCGATACGACAATGAGAAAATCTACTACCCCAACGCAGTTTTGCTCAACAAGCCAATAAGCAATTTCTATAGGAGTCCAGAGATGTGGGATTCTATTGATTTCGTTGTTGATGTTTCAACTCCTATGGAGACCATCATTTCACTCAAGAAAGCAATTCAAACGTACATAGAGAGCAAGCCCAAGTACTGGAATCCAAAGCACGCAGTGATAGCCAAAGAGATAGAGAATGTGGATAAGCTGAAGCTGTGTCTGTGTGTTCAACATACTATCAACCATCAGAACTACGGGGAACGAAACAATCGGATCACAGAGCTTTTGCTAGAGCTGAAGAAGATCTTTGAGGTACATGGAGTCAAGTACAATCTTCTGCCTCAGGAAGTCCACATTACCAAGATGAACAGTACCGGAAATGGGAGACCTGTGTTGTAA 2124 0.4727 MDKPKTDQVVLFIDHLNTGHPSMETHQNNINNDTTTTTNKPKLTSRVKTLNRLSFSKPKSRIQEHYHPLYTQFTVSEEAEDIAGRYSSTDDEWNEDDDEEEDQVEEDGPKSHEKTKRRRRKIQWKRVVEWALFLIILTSLVSCLTIPSIKTKYSWGLEIWKWCLMGMVTFSGRLVSGWLVAVSVFIIERNFMLREKVLYFIYGLRKSIRNCIWLGLVLFSYWTVVFDNVQKKNHKFLNKVFQALVAVLVGAIIWLVKIVLVKMLASSFHVATYFDRMKESVFHHYILDTLSGPPLEENDETTSQHTLTGSKSMPANWKGRNKAIKEAKNLHKSKKFGSRKIDMDKLRELSMKSTASAWSVKRLVNYVKSSGLSTISRTIDDFGNAESEICSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEVHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKIASSIVTVIIIVVLLLVMELATIKVILFVITQIVLVGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDDVHMTVEEMNILTTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMWDSIDFVVDVSTPMETIISLKKAIQTYIESKPKYWNPKHAVIAKEIENVDKLKLCLCVQHTINHQNYGERNNRITELLLELKKIFEVHGVKYNLLPQEVHITKMNSTGNGRPVL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1380 707 SUPERFAMILY Sm-like ribonucleoproteins 529 587 IPR010920 -
Prci10g1380 707 MobiDBLite consensus disorder prediction 18 40 - -
Prci10g1380 707 PIRSF Memb_At2g17000 14 704 IPR016688 -
Prci10g1380 707 MobiDBLite consensus disorder prediction 91 106 - -
Prci10g1380 707 FunFam Predicted mechanosensitive ion channel 538 587 - -
Prci10g1380 707 MobiDBLite consensus disorder prediction 20 40 - -
Prci10g1380 707 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 21 699 IPR016688 -
Prci10g1380 707 Gene3D - 538 587 IPR023408 -
Prci10g1380 707 Pfam Mechanosensitive ion channel 480 684 IPR006685 GO:0016020|GO:0055085
Prci10g1380 707 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1380 Prci-Chr10 9230234 9235492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1380 21 698 Mechanosensitive Ion Channel Family AT5G12080 43.732 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1380 K22048 - gmx:100813521 1011.91