Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1369 ATGGAGTTCAGCGAGCATGAGGGCATGACAGTTCGAGAAGTCTGTGAAAATGGGAGTTGCATGGGAACAGCAGAAGTTGAAGCAAAGCTTGATGAAGGAGATATTCAAGAGGCAGAATCTTCATTGCGTGAAGGCTTATCACTCAATTTTGAGGAAGCAAGGGCACTTCTGGGGAAGTTGGAGTATCAGAGAGGGAATGTGGAAGGCGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCATACAGCGATTGCAACCTTCCATTCCGGAAAAACCATTAACTAAGAAGGGGCGGATTCGTACTGAGCCACCTCCTTCGGTCTCTCAGCATGCTGCTAGTTTGGTACTTGAAGCCATCTACTTAAAAGCACGTTCTCTACAAACTCTAGGGAGATTAACTGAAGCTGCAAATGAATGCAAAAGTGTGCTTGATGCCGTTGAAAAGATATTTTATCAGGGAATACCTGATATTCATGTGGACAATAGATTGCAAGAGATAGTGAGCCATGCTGTAGAGCTCCTTCCAGAGCTTTGGACACAGGCTGGTTGCTATCATGAGGCAATATCTGCCTATAGGCGTGCCCTTCTCAGTCAATGGAACCTTGCTAATGATTGCTGTGCAAGAATTCAGAAAAGTTTTGTTGTATTTTTGTTGTACAGTGGGGTAGAGGCTAGCCCACCCAGTTTAGCGGTTCAGATTGATGGGTCATATGTACCTAAAAATAATTTGGAAGAGGCAATTCTGCTTCTTATGATTCTCATTAGAAAGTTTTGCTTTGGTCAGACCAAATGGGATCCATCAGTGATGGAACACCTGACTTTTGCACTTTCTGTATGTGGCCAAACATCTGTATTGGCTAAGCAACTTGAAGAGCTAATGCCTGGGGTTTACAGTCGGACTGACCGTTGGAATTATTTAGCTTTATGTCAGAGTGGAGCTAGACATAACAAAAGTGCTTTGAATCTTCTGCGGAAGTCTTTGCGTAATCATGATCGACCAGATGAGGTTATGTCACTGCTGTTGGCTGCCAGGATCTGCTGTGAGGATCCTCAACTTGCTCCTGAGGGAGTAGGGTATGCACAAAGGGCAATCGCAAATGCTCAGGGACCAAATGAGCATCTTAAAGGTGTGGGTCTCCGAATGTTGGGACTTTGTCTGGGAAAGCAAGCTAAGGCTGCTTCCTCTGACTTTGAGAGGTCTTGCCTTCAGTCCAAAGCTTTGAAATCATTGGAGGAGGCAGCTGGAGTGGAGCCAAAAAATTCTGATATAACCCTTGAGCTGGCAATTAAATATGCAGAGCACCGGAATTTGACCACTGCTTTGTCCTATGCAAAGAAGTTCTTTGATGAAACAGGTGGATCTATATTAAAAAGTTGGAGAATGCTTGCCCTGGTTTTGTCTGCTCAACAAAAAATTTCAGAGGCTGAGGTGGTAACAGATGCAGCTCTAGATCAAACTACAAAATGGGAACAGGGCCCGCTGCTTAGGCTGAAAGCAAAGCTTAAGATCTCCCAATCACGACACATGGATGCTATTGAAACATATCGGTACCTCCTTGCATTGGTTCAAGCCCAGAGAAAATCCTTTGGCTCACTCTTTACTTGTCCGCAGGTTGATGATGGTAAAGTAAATGAATTTGAGATTTGGCATGGTCTGGCAAATTTATATGCCAGTCTTTCTCATTGGAAGGATGCTGAAATATGTTTGCGAAAGGCCAAAGTGTTGAAGCCATATTCTGCTGCATTGATGCACACCAAAGGTGTAATATTTGAAGGATGTGAAGAAGATCAAGCTGCTCTTGGTGCCTTCTTTAGCGCATTCATCCTGGATCCAAGCTATGTTCCAAGCAAGATCTTGTTAGGTTCTCTAATGCTAAAAATCGGTTCAAAGGGATTGCCTGTGGCTAGAAGCTTACTTTCTGAAGCTCTGAGAGTAGACCCCACTAATTGCAAGGCTTGGTATTATATGGGTGTTGTTCACAAAGAGGATGGTCGGATGAGTGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCGGATCCGATTGAAAGTTTCAGCTCTGTTATTTGA 2085 0.4417 MEFSEHEGMTVREVCENGSCMGTAEVEAKLDEGDIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSIPEKPLTKKGRIRTEPPPSVSQHAASLVLEAIYLKARSLQTLGRLTEAANECKSVLDAVEKIFYQGIPDIHVDNRLQEIVSHAVELLPELWTQAGCYHEAISAYRRALLSQWNLANDCCARIQKSFVVFLLYSGVEASPPSLAVQIDGSYVPKNNLEEAILLLMILIRKFCFGQTKWDPSVMEHLTFALSVCGQTSVLAKQLEELMPGVYSRTDRWNYLALCQSGARHNKSALNLLRKSLRNHDRPDEVMSLLLAARICCEDPQLAPEGVGYAQRAIANAQGPNEHLKGVGLRMLGLCLGKQAKAASSDFERSCLQSKALKSLEEAAGVEPKNSDITLELAIKYAEHRNLTTALSYAKKFFDETGGSILKSWRMLALVLSAQQKISEAEVVTDAALDQTTKWEQGPLLRLKAKLKISQSRHMDAIETYRYLLALVQAQRKSFGSLFTCPQVDDGKVNEFEIWHGLANLYASLSHWKDAEICLRKAKVLKPYSAALMHTKGVIFEGCEEDQAALGAFFSAFILDPSYVPSKILLGSLMLKIGSKGLPVARSLLSEALRVDPTNCKAWYYMGVVHKEDGRMSDAADCFQAASMLEESDPIESFSSVI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1369 694 ProSiteProfiles TPR repeat profile. 652 685 IPR019734 GO:0005515
Prci10g1369 694 SUPERFAMILY TPR-like 405 507 IPR011990 GO:0005515
Prci10g1369 694 Gene3D Tetratricopeptide repeat domain 634 690 IPR011990 GO:0005515
Prci10g1369 694 SMART tpr_5 652 685 IPR019734 GO:0005515
Prci10g1369 694 SMART tpr_5 582 615 IPR019734 GO:0005515
Prci10g1369 694 SMART tpr_5 548 581 IPR019734 GO:0005515
Prci10g1369 694 SMART tpr_5 118 151 IPR019734 GO:0005515
Prci10g1369 694 SMART tpr_5 458 491 IPR019734 GO:0005515
Prci10g1369 694 SMART tpr_5 302 335 IPR019734 GO:0005515
Prci10g1369 694 Pfam Tetratricopeptide repeat 654 685 IPR019734 GO:0005515
Prci10g1369 694 Gene3D Tetratricopeptide repeat domain 545 633 IPR011990 GO:0005515
Prci10g1369 694 PANTHER PROTEIN NPG1 5 691 IPR043376 -
Prci10g1369 694 Gene3D Tetratricopeptide repeat domain 23 218 IPR011990 GO:0005515
Prci10g1369 694 Gene3D Tetratricopeptide repeat domain 237 537 IPR011990 GO:0005515
Prci10g1369 694 SUPERFAMILY TPR-like 497 682 IPR011990 GO:0005515
Prci10g1369 694 SUPERFAMILY TPR-like 33 450 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1369 Prci-Chr10 9150982 9155481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1369 2 694 Calmodulin-binding Proteins AT2G43040 71.347 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1369 K21843 - gmx:100814609 1041.95