Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1349 ATGCTCGGCAACTTCAGCCGATGCAAGCCGACGTCGCGATCGGATTTGTCCAAGGACGTTGCTCCGTTGCCGTCGTTTCGGAGGCTGTCGTTCTCGGATCTGAGCCGGTCGTCTTCGATGCGAATCAACGAGGATCTGGCACAATCGTTCGGGTCGGATCTGCACGATTTCCAGTTGAGCGAGCTGCGAGCCATAACGCAGAATTTCTCAAGCAACCTCTTGCTGGGGGAAGGAGGGTTCGGGACGGTGCATAAGGGTTACATCGATGATAATTTCAGGCAGGGCCTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTCGACGTTGAAGGCTTGCAAGGACATCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGGCAGCTAAGGCACCCCAACTTGGTGAAGCTGATAGGATATTGTTGTGAGGAAGAAGAACGGCTCCTAGTCTACGAATTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCATGGGCAACTAGATTAAAGATAGCAATTGGGGCTGCTAAGGGCCTCTCCTTCTTGCATGGGGCAGAGAATCCTGTCATTTACAGGGACTTCAAAACTTCCAATATCTTGCTTGATTCTGATTTTACAGCAAAGTTGTCAGATTTCGGATTAGCAAAAATGGGGCCAGAGGGATCTAAATCTCACGTTACCACCAGAGTCATGGGCACCTATGGATATGCAGCCCCTGAATACATCACAACGGGTCACTTGACCACAAAAAGTGATGTGTATAGCTTTGGGGTGGTCCTGCTAGAACTACTAACAGGAAGAAGGGCAATGGAGAAGACAAGACCAAAGACTGAGCAGAACCTTGTGGATTGGTCAAAGCCTTATTTGAGTAGTTCTAGGAAGCTGAGGTATATAATGGATCCAAGGCTTGCAGGGCAGTACTCTGTGAAGGGTGCGAAGGAGATGGCTCGTTTGGCCCTGCAATGCATAAGTCTGAATCCTAAAGACAGGCCGAGGATGCCGGCCATTGTTGAAACTCTTGAATACTTGCAGCAGTTCAAGGACATGGCTATTACATGTGGACAATGGCCTGCTTCAGCGAAATCTAGAAATGGATCTTCTGATAAGATCAAAATTGATATCAGAGTTGGTGCAAACCACAGGAAGCCCTCTCCTGTAGTTTCAAGCAAAAAAACTTGA 1194 0.4832 MLGNFSRCKPTSRSDLSKDVAPLPSFRRLSFSDLSRSSSMRINEDLAQSFGSDLHDFQLSELRAITQNFSSNLLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDVEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAIGAAKGLSFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYITTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQNLVDWSKPYLSSSRKLRYIMDPRLAGQYSVKGAKEMARLALQCISLNPKDRPRMPAIVETLEYLQQFKDMAITCGQWPASAKSRNGSSDKIKIDIRVGANHRKPSPVVSSKKT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1349 397 ProSiteProfiles Protein kinase domain profile. 69 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1349 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Prci10g1349 397 Gene3D Transferase(Phosphotransferase) domain 1 152 360 - -
Prci10g1349 397 Gene3D Phosphorylase Kinase; domain 1 32 151 - -
Prci10g1349 397 FunFam Serine/threonine-protein kinase PBS1 152 359 - -
Prci10g1349 397 CDD STKc_IRAK 75 346 - -
Prci10g1349 397 ProSitePatterns Protein kinases ATP-binding region signature. 75 104 IPR017441 GO:0005524
Prci10g1349 397 SUPERFAMILY Protein kinase-like (PK-like) 51 349 IPR011009 -
Prci10g1349 397 PANTHER OS01G0588500 PROTEIN-RELATED 40 349 - -
Prci10g1349 397 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Prci10g1349 397 FunFam Serine/threonine-protein kinase BIK1 35 151 - -
Prci10g1349 397 MobiDBLite consensus disorder prediction 378 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1349 Prci-Chr10 8987860 8991746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1349 57 387 Glycoside Hydrolase AT3G07070 48.657 3.15e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci10g1349 PK_Tyr_Ser-Thr 6.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1349 - - gmx:100814241 667.537