Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1348 ATGAAGCAGCCATCCAAGTCGAAGCCATGGAGGCCACTCACGGCGAATTGCTGCTCCACGAAGGGCCAAACCATGCTCGGCAACTTCAGCCGATGCAAGCCGACGTCGCGATCGGATTTGTCCAAGGACGTTGCTCCGTTGCCGTCGTTTCGGAGGCTGTCGTTCTCGGATCTGAGCCGGTCGTCTTCGATGCGAATCAACGAGGATCTGGCACAATCGTTCGGGTCGGATCTGCACGATTTCCAGTTGAGCGAGCTGCGAGCCATAACGCAGAATTTCTCAAGCAACCTCTTGCTGGGGGAAGGAGGGTTCGGGACGGTGCATAAGGGTTACATCGATGATAATTTCAGGCAGGGCCTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTCGACGTTGAAGGCTTGCAAGGACATCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGGCAGCTAAGGCACCCCAACTTGGTGAAGCTGATAGGATATTGTTGTGAGGAAGAAGAACGGCTCCTAGTCTACGAATTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCATGGGCAACTAGATTAAAGATAGCAATTGGGGCTGCTAAGGGCCTCTCCTTCTTGCATGGGGCAGAGAATCCTGTCATTTACAGGGACTTCAAAACTTCCAATATCTTGCTTGATTCTGATTTTACAGCAAAGTTGTCAGATTTCGGATTAGCAAAAATGGGGCCAGAGGGATCTAAATCTCACGTTACCACCAGAGTCATGGGCACCTATGGATATGCAGCCCCTGAATACATCACAACGGGTCACTTGACCACAAAAAGTGATGTGTATAGCTTTGGGGTGGTCCTGCTAGAACTACTAACAGGAAGAAGGGCAATGGAGAAGACAAGACCAAAGACTGAGCAGAACCTTGTGGATTGGTCAAAGCCTTATTTGAGTAGTTCTAGGAAGCTGAGGTATATAATGGATCCAAGGCTTGCAGGGCAGTACTCTGTGAAGGGTGCGAAGGAGATGGCTCGTTTGGCCCTGCAATGCATAAGTCTGAATCCTAAAGACAGGCCGAGGATGCCGGCCATTGTTGAAACTCTTGAATACTTGCAGCAGTTCAAGGACATGGCTATTACATGTGGACAATGGCCTGCTTCAGCGAAATCTAGAAATGGATCTTCTGATAAGATCAAAATTGATATCAGAGTTGGTGCAAACCACAGGAAGCCCTCTCCTGTAGTTTCAAGCAAAAAAACTTGA 1266 0.4889 MKQPSKSKPWRPLTANCCSTKGQTMLGNFSRCKPTSRSDLSKDVAPLPSFRRLSFSDLSRSSSMRINEDLAQSFGSDLHDFQLSELRAITQNFSSNLLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDVEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAIGAAKGLSFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYITTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQNLVDWSKPYLSSSRKLRYIMDPRLAGQYSVKGAKEMARLALQCISLNPKDRPRMPAIVETLEYLQQFKDMAITCGQWPASAKSRNGSSDKIKIDIRVGANHRKPSPVVSSKKT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1348 421 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Prci10g1348 421 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1348 421 SUPERFAMILY Protein kinase-like (PK-like) 75 373 IPR011009 -
Prci10g1348 421 MobiDBLite consensus disorder prediction 402 421 - -
Prci10g1348 421 FunFam Serine/threonine-protein kinase BIK1 59 175 - -
Prci10g1348 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Prci10g1348 421 Gene3D Transferase(Phosphotransferase) domain 1 176 384 - -
Prci10g1348 421 FunFam Serine/threonine-protein kinase PBS1 176 383 - -
Prci10g1348 421 Pfam Protein tyrosine and serine/threonine kinase 98 369 IPR001245 GO:0004672|GO:0006468
Prci10g1348 421 PANTHER OS01G0588500 PROTEIN-RELATED 60 373 - -
Prci10g1348 421 Gene3D Phosphorylase Kinase; domain 1 56 175 - -
Prci10g1348 421 CDD STKc_IRAK 99 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1348 Prci-Chr10 8987860 8991790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1348 81 411 Glycoside Hydrolase AT3G07070 48.657 5.15e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci10g1348 PK_Tyr_Ser-Thr 7.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1348 - - gmx:100814241 705.671