Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1347 ATGATGGTGATGATCACATCAGAAACCCTAAAATGTATTAATTACACAGAGTGGTTAGAGCAGCCATCCAAGTCGAAGCCATGGAGGCCACTCACGGCGAATTGCTGCTCCACGAAGGGCCAAACCATGCTCGGCAACTTCAGCCGATGCAAGCCGACGTCGCGATCGGATTTGTCCAAGGACGTTGCTCCGTTGCCGTCGTTTCGGAGGCTGTCGTTCTCGGATCTGAGCCGGTCGTCTTCGATGCGAATCAACGAGGATCTGGCACAATCGTTCGGGTCGGATCTGCACGATTTCCAGTTGAGCGAGCTGCGAGCCATAACGCAGAATTTCTCAAGCAACCTCTTGCTGGGGGAAGGAGGGTTCGGGACGGTGCATAAGGGTTACATCGATGATAATTTCAGGCAGGGCCTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTCGACGTTGAAGGCTTGCAAGGACATCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGGCAGCTAAGGCACCCCAACTTGGTGAAGCTGATAGGATATTGTTGTGAGGAAGAAGAACGGCTCCTAGTCTACGAATTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCATGGGCAACTAGATTAAAGATAGCAATTGGGGCTGCTAAGGGCCTCTCCTTCTTGCATGGGGCAGAGAATCCTGTCATTTACAGGGACTTCAAAACTTCCAATATCTTGCTTGATTCTGATTTTACAGCAAAGTTGTCAGATTTCGGATTAGCAAAAATGGGGCCAGAGGGATCTAAATCTCACGTTACCACCAGAGTCATGGGCACCTATGGATATGCAGCCCCTGAATACATCACAACGGGTCACTTGACCACAAAAAGTGATGTGTATAGCTTTGGGGTGGTCCTGCTAGAACTACTAACAGGAAGAAGGGCAATGGAGAAGACAAGACCAAAGACTGAGCAGAACCTTGTGGATTGGTCAAAGCCTTATTTGAGTAGTTCTAGGAAGCTGAGGTATATAATGGATCCAAGGCTTGCAGGGCAGTACTCTGTGAAGGGTGCGAAGGAGATGGCTCGTTTGGCCCTGCAATGCATAAGTCTGAATCCTAAAGACAGGCCGAGGATGCCGGCCATTGTTGAAACTCTTGAATACTTGCAGCAGTTCAAGGACATGGCTATTACATGTGGACAATGGCCTGCTTCAGCGAAATCTAGAAATGGATCTTCTGATAAGATCAAAATTGATATCAGAGTTGGTGCAAACCACAGGAAGCCCTCTCCTGTAGTTTCAAGCAAAAAAACTTGA 1320 0.4833 MMVMITSETLKCINYTEWLEQPSKSKPWRPLTANCCSTKGQTMLGNFSRCKPTSRSDLSKDVAPLPSFRRLSFSDLSRSSSMRINEDLAQSFGSDLHDFQLSELRAITQNFSSNLLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDVEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAIGAAKGLSFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYITTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQNLVDWSKPYLSSSRKLRYIMDPRLAGQYSVKGAKEMARLALQCISLNPKDRPRMPAIVETLEYLQQFKDMAITCGQWPASAKSRNGSSDKIKIDIRVGANHRKPSPVVSSKKT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1347 439 CDD STKc_IRAK 117 388 - -
Prci10g1347 439 FunFam Serine/threonine-protein kinase BIK1 77 193 - -
Prci10g1347 439 PANTHER OS01G0588500 PROTEIN-RELATED 77 391 - -
Prci10g1347 439 Pfam Protein tyrosine and serine/threonine kinase 116 387 IPR001245 GO:0004672|GO:0006468
Prci10g1347 439 Gene3D Phosphorylase Kinase; domain 1 74 193 - -
Prci10g1347 439 Gene3D Transferase(Phosphotransferase) domain 1 194 402 - -
Prci10g1347 439 ProSiteProfiles Protein kinase domain profile. 111 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1347 439 ProSitePatterns Protein kinases ATP-binding region signature. 117 146 IPR017441 GO:0005524
Prci10g1347 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Prci10g1347 439 MobiDBLite consensus disorder prediction 420 439 - -
Prci10g1347 439 FunFam Serine/threonine-protein kinase PBS1 194 401 - -
Prci10g1347 439 SUPERFAMILY Protein kinase-like (PK-like) 93 391 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1347 Prci-Chr10 8987860 8991942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1347 99 429 Glycoside Hydrolase AT3G07070 48.657 8.00e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci10g1347 PK_Tyr_Ser-Thr 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1347 - - gmx:100814241 702.975