Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1331 ATGGAGAGTGGAAGAATAAGTCAGGTTTTGAAATTGAATCTTCTAGTATTTCTATTGATATTGCTGAAAACAGAAGGCTTCTTTGTACCAATCACTTATATTGAGAATGCAGTGGCTAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGACAAGGGTTTTGGATCAGGGATTAACAATTGGCTCATACACATTGAGGGAGGAGGATGGTGTAACAATGTCACCACGTGCCTTTCCCGAAAGAGCACTCGCTTAGGTTCTTCTAAGCAAATGGCCAAGCAGGTTGCCTTCTCTGGAATTCTTAGCAACAAGGAAAACTTTAATCCAGATTTCTACAATTGGAATAGAATCAAAGTTAGGTACTGTGATGGTGCGTCATTCACCGGTGATGTGGAAGCTGTGGATTCAGACACAGATCTTCACTTCAGAGGAGCAAGAGTTTTCGTTGCTGTCATTGAGGATTTGTTGGCTAAAGGAATGAAAAATGCTGAAAATGCTATCCTCTCTGGCTGTTCAGCTGGAGGATTGACTTCTATATTGCATTGTGATGGCTTTCGGGCTCTAGTGCCTGCGGAGGCTAAAGTGAAATGTTTGTCAGATGCTGGTTACTTCATTAACGCAAAGGATGTCTCAGGAGCACAACACATTGAACAATTTTACAGTCAAGTTGTTGAAACACACGGTTCAGCAAAAAATTTACCTCGATCCTGCACTACAAGACTCAGCCCAGGACTCTGCTTCTTCCCACAATATGTGGCATCACAAATCACTACCCCGATTTTCTTTGTAAATGCAGCCTACGACTCATGGCAGATAAAAAACATTTTGGCACCGGGTGTCGCTGATCCCCATGGCCGTTGGCATAGCTGCAAACTTGATATAAACAACTGCTCATCCGATCAACTTGGTATCATGCAAGATTTCAGGTTGGACTTTTTGAAGGCATTGACCGTTCTGGGGAACACTTCGTCCAAAGGAATGTTTATAGACTCCTGCTATGCCCACTGCCAAACAGAAATGCAGGAGACGTGGTTCAGAAGTGACTCTCCGGTGCTGCACAACACAACAATTGCAAAAGCAGTAGGAGACTGGTACTTTGAACGAAGCACAATGGACTGGGCATTTGTGCATAAAACATGGGATAAGTGGGCTTCTACTAGCATTGGTTCTTCTGGTCAACCTTTAAAAGCTGCTTTGCTGATAAATTATGACCCATATGGACCTTCACGTCTATTGTCTACCATTGCTGAACAAGAGGGAATTAAAGCCAATCCCATTGAATTGAATCACTTTGTTGACTACGTTAAACGTAACAAACTCCAGACGGAAAGCTTCATAATTGGGCCCAATCAATATTTGGTCACATCAATTCATGAGAGTTGGTTCAGTGCTAGGTGCATGAACACATCAAAGCCTGCTGGCGAAGGTGCAGTTGTTATGCAGACAGCAGCATATATCTTGGTTGCCCTGTATGAAGGTTCTATTGGTTCAGCATCTCGTGCTGTGGCTGCTGCTGATCAGTTTGTTTGGCAATTGGGGCGTAAAAATCTTTAG 1566 0.433 MESGRISQVLKLNLLVFLLILLKTEGFFVPITYIENAVAKGAVCLDGSPPAYHFDKGFGSGINNWLIHIEGGGWCNNVTTCLSRKSTRLGSSKQMAKQVAFSGILSNKENFNPDFYNWNRIKVRYCDGASFTGDVEAVDSDTDLHFRGARVFVAVIEDLLAKGMKNAENAILSGCSAGGLTSILHCDGFRALVPAEAKVKCLSDAGYFINAKDVSGAQHIEQFYSQVVETHGSAKNLPRSCTTRLSPGLCFFPQYVASQITTPIFFVNAAYDSWQIKNILAPGVADPHGRWHSCKLDINNCSSDQLGIMQDFRLDFLKALTVLGNTSSKGMFIDSCYAHCQTEMQETWFRSDSPVLHNTTIAKAVGDWYFERSTMDWAFVHKTWDKWASTSIGSSGQPLKAALLINYDPYGPSRLLSTIAEQEGIKANPIELNHFVDYVKRNKLQTESFIIGPNQYLVTSIHESWFSARCMNTSKPAGEGAVVMQTAAYILVALYEGSIGSASRAVAAADQFVWQLGRKNL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1331 521 PANTHER NOTUM-RELATED 18 374 IPR004963 GO:0016787
Prci10g1331 521 Pfam Profilin 383 513 IPR005455 GO:0003779
Prci10g1331 521 Pfam Pectinacetylesterase 23 374 IPR004963 GO:0016787
Prci10g1331 521 Gene3D Dynein light chain 2a, cytoplasmic 383 520 - -
Prci10g1331 521 SUPERFAMILY Profilin (actin-binding protein) 384 517 IPR036140 -
Prci10g1331 521 Coils Coil 518 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1331 Prci-Chr10 8906672 8915684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1331 4 521 Carbohydrate Esterase AT4G19410 61.272 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1331 K19882 - vvi:100245856 845.884