Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1325 ATGCGAGAGGTTCACAAAAGAGCACAAACAGATACGGAAGTGAGGAAGTTTGGGGGTCAATTTTGCACGAGGCACAGTGAGGCAGAACTGGTGGTGCCTGCAAAACCAACCCCGCATGAAACCAAGAAGCTATCAGACATAGACGACCAAGAGGGCCTTCGATTTCAGCTTCCTCTTGTGATGTTCTTCCATGGAAGGAAATCAAAATCGAAGGACGACCCTGCTTTGGTGATCAAAGAGGCAATAAGCGAAGCACTGGTGTATTACTATCCACTCGCAGGCAGACTCAGAGAAGTAGCGAACAGAAAGCTGGTGGTGGAGTGCAATGGAGAGGGTGTGTTGTTCGTGGAAGCTGAAGCTGATATATCGCTCATGGAGCTTGGGGATGAAATTATATGCCACCATGTCCTTATCTCAATCACTTTCTTCTTCCCTTGCCTGCCTCTCAACACATTCTTGGATGCCCTCTCTTGTTCTTTCAGAGCAATTTTATCTAATAATTCTCGATTTGTGTTGGGCGTGTGGATGAATCATACAATCTGCGATACACTTGGCCTCGTTCAGTTCCTCAAAATGGCCTCTGAATGCGCAACTCACTCTCCGATCTCTAAAATCCCTGTTTGGCACAGAGACCTCTTGTCTGCACGACACCCACCTCGCATCACTTGCCTTCATCACGAATACCACGAACCCACTTCTTCGCAGCCTGACCAACAAAACTTGGATTCCCTTCCCGATAGCCGAACAGTCCATGAATCTTTCTTCTTTGGCCCCAAACACATTCTCTCGCTTCGAAATCGTCTCACTCGTCGCCTTCGGAATTGCTCCACCTTCGAGTTGCTGACTGCGTGTTTGTGGAAATGCCGCACTGAAGCGCTTGACCTGAAACCCAGCGAGATTGTGTCTATTTCACCTTTTATCACAGCTCGAGGAAAACAAAGCCTAGACTTGCCTGATGGGTATTATGGGAATGCTTTTGCTTTCCCGACGGCGATATCAGATGCTGGATTGATCTGCAACAACCCAATGGGCTACGCGTTGGAGTTGATCAGAGAGGCTAAAGCACAGATGAACAAAGAGTACATGAGCTCCGTGGCTGATCTTATAGTGCTCAAGGGGCGTCCTATGTATAGAAGGAATGAATATCTTGTGGCTGATTCGACTCGTGTGGGGTTTTACGAGGTGGATTTTGGGTGGGGAAAAGTAGTATATGGTGGACCTGCTGGAGCTATACCATGTGTTAGCTTCTATGCTGCGTTCAAGAATACGAGAGGACAGGATGGCATTGTGGTGCCCATATTGCTGCCAAGGAAAGCCATGAACAGGTTCCTTTCTCTGGTGGAGAAGATCACGAGTGAGAACGCTATGGATGATCAATCTCATGAATATGCTGATGGTATGGCGAAGGAAGTTAAATCAAAGCTTTGA 1428 0.4748 MREVHKRAQTDTEVRKFGGQFCTRHSEAELVVPAKPTPHETKKLSDIDDQEGLRFQLPLVMFFHGRKSKSKDDPALVIKEAISEALVYYYPLAGRLREVANRKLVVECNGEGVLFVEAEADISLMELGDEIICHHVLISITFFFPCLPLNTFLDALSCSFRAILSNNSRFVLGVWMNHTICDTLGLVQFLKMASECATHSPISKIPVWHRDLLSARHPPRITCLHHEYHEPTSSQPDQQNLDSLPDSRTVHESFFFGPKHILSLRNRLTRRLRNCSTFELLTACLWKCRTEALDLKPSEIVSISPFITARGKQSLDLPDGYYGNAFAFPTAISDAGLICNNPMGYALELIREAKAQMNKEYMSSVADLIVLKGRPMYRRNGXYLVADSTRVGFYEVDFGWGKVVYGGPAGAIPCVSFYAAFKNTRGQDGIVVPILLPRKAMNRFLSLVEKITSENAMDDQSHEYADGMAKEVKSKL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1325 476 Gene3D - 230 448 IPR023213 -
Prci10g1325 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 29 444 - -
Prci10g1325 476 Gene3D - 21 229 IPR023213 -
Prci10g1325 476 Pfam Transferase family 27 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1325 Prci-Chr10 8872928 8876405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1325 27 451 Monolignol Biosynthesis Gene Families AT5G48930 26.292 3.99e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1325 K19861 - pcin:129322063 960.674