Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1304 ATGCCACAGAACTCCATAGCACCAAAACCAGAATACTGCAGTAGTAGCCCCGTAGAAGAAGGAGCGCAAGAGATGTCAGAGCTCCATAACTCAGCTGTCCTTGCCTACCCCGTACAAACCAATGAACAATCTTTACCCAAACTGAATTTGTACCCGATAACTCTGAAGTTCGAGGAACTGGTTTACAAAGTTAAACTAGAGCAGAAAGGACTGTGTTGGGGTAGTTCATGGAATTCCAAGGAGAAGACCATATTGAATGGGATTACAGGTATGGTTTGCCCAGGAGAAATACTGGCTATGCTGGGTCCCTCTGGCAGTGGGAAAACCACACTTCTCACAGCTCTTGGAGGCCGTCTCAATGGTAAATTATCTGGGAAGATCACATACAACAATCAGCCCTTCTCAGGTTCCATAAAGAGAAGAACTGGGTTTGTGGCTCAGGACGATGTTCTATACCCTCATCTGACTGTTTTTGAGACTCTATTGTTCACTGCACTTTTGAGGTTGCCTAACAGTTTGACCAGAGATGAAAAAGTCGAGCATGTAGAGCGGGTTATTGTTGAGTTAGGACTGACTCGGTGCAGGGGAAGCATGATAGGAGGTCCACTTTTCAGAGGAATATCAGGTGGAGAGAAAAAGAGGGTAAGCATAGGTCAGGAAATGCTCATCAATCCAAGCCTTTTGCTGCTAGATGAGCCCACCTCAGGTTTGGACTCTACCACAGCTCAGAGGATCCTAAACACGATCAAACGTCTGGCAAGTGGAGGTAGAACTGTTGTGACCACCATACACCAGCCATCTAGTCGTCTCTACTACATGTTTGATAAGGTAGTCTTGCTATCTGAAGGCTGCCCCATCTATAATGGTCCTGCTACTACAGCCTTGGAGTACTTTTCATCCATTGGTTTTTCCACATCCATGACTGTCAATCCAGCCGATCTCTTGCTTGATCTTGCCAATGGGATTGCCCCAGACTCCAAAAATGCAGCTGAACAAAGTGAGAGCCTGGAGCAAGAAAGAAAGCTAGTCAGGGAAGCCCTGATTTCTGCGTACGACAAGAACATAGCAACAAGGTTGAAAACTGAGCTTTGCAGCCTGAACGTGAACAACTACAATATCACAAAAGATGCCTCTGCAAAAAGTGACATAAAACCAGAGCAATGGTGCACAAGCTGGTGGTACCAGTTTAAGGTACTACTACAAAGGGGCCTAAGGGAGAGAAGATATGAAGCTTTCAACAGGCTGAGAATTTTCCAAGTCATAAGTGTCGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTCAAGACCGGGTTGCCTTGATCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTATACAATGCAGTTTTCACATTTCCTCAAGAAAGAAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACCGCCTTTCATCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCACTGGAGCTGGCTCTTCCAACTGCATTTGTCTTTATACTTTACTGGATGGGAGGGCTTAAACCTCACCCTATGACGTTCATCCTTTCCCTTCTTGTGGTTCTTTACAGTGTTCTTGTCTCGCAAAGTCTTGGCTTAGCATTCGGTGCTATTCTTATGGAGATCAAGCAGGCCACTACCTTAGCTTCTGTCACAACCCTTGTATTTCTCATTGCTGGAGGATACTACGTACAACAGATCCCTCCCTTCATAATGTGGTTCAAGTACTTGAGTTACAGCTACTATTGTTACAAACTTCTTCTTGGTGTTCAGTACAATGACAATGATGTTTATGAGTGCTCAAAGGGTGTCTTCTGTAGGGTTGGAGAATTTCCTCCGATCAAATCAATGGGTTTGAATCATCTGTGGGTTGATGTGGCCATTATGGCTTTGATGTTGGTAGGTTATCGACTTGTTGCTTACATAGCATTGCATAGAGTGAGGTAA 1971 0.4465 MPQNSIAPKPEYCSSSPVEEGAQEMSELHNSAVLAYPVQTNEQSLPKLNLYPITLKFEELVYKVKLEQKGLCWGSSWNSKEKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVFETLLFTALLRLPNSLTRDEKVEHVERVIVELGLTRCRGSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYNGPATTALEYFSSIGFSTSMTVNPADLLLDLANGIAPDSKNAAEQSESLEQERKLVREALISAYDKNIATRLKTELCSLNVNNYNITKDASAKSDIKPEQWCTSWWYQFKVLLQRGLRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALIFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFILYWMGGLKPHPMTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIMWFKYLSYSYYCYKLLLGVQYNDNDVYECSKGVFCRVGEFPPIKSMGLNHLWVDVAIMALMLVGYRLVAYIALHRVR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1304 656 CDD ABCG_EPDR 52 289 - -
Prci10g1304 656 Coils Coil 326 346 - -
Prci10g1304 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 649 - -
Prci10g1304 656 FunFam ABC transporter G family member 22 72 301 - -
Prci10g1304 656 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
Prci10g1304 656 Pfam ABC-2 type transporter 394 600 IPR013525 GO:0016020|GO:0140359
Prci10g1304 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 301 IPR027417 -
Prci10g1304 656 Gene3D - 73 301 IPR027417 -
Prci10g1304 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Prci10g1304 656 Pfam ABC transporter 85 235 IPR003439 GO:0005524
Prci10g1304 656 MobiDBLite consensus disorder prediction 1 21 - -
Prci10g1304 656 Pfam ABC-2 type transporter 264 351 IPR043926 GO:0140359
Prci10g1304 656 SMART AAA_5 94 284 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1304 Prci-Chr10 8602100 8605277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1304 84 283 Calmodulin-binding Proteins AT2G36910 29.327 9.63e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1304 K05681 - gmx:100780191 1147.11