Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1290 ATGAAAGGGCGCTCGCACCGCCTGCAGAGTTCGGACCCTCCCGACGACTGGATTGATGGTTCCTGGACTGTGGATTGCGTATGCGGTGTGAATTTTGACGATGGGGAAGAGATGGTGAATTGTGACGAGTGCGGTGTGTGGGTGCACACGCGTTGCTCGCGGTATGTCAAAGGAGATGATATGTTTGCATGCGATAAGTGCAAGAGCAAGATTAATCGATCTGATACGGAGGAAACGGAGGTGGCCCAATTGTTAGCCGAGCTCCCTACAAAGACCGTGAGAATGGAGAATTCATTTGCACCCATCGGAGCTCCTCGGCGTCCTTTCAAGCTTTGGACTGACATACCTATGGAGGAGAGGGTGCACATTCAAGGAATTCCAGGTGGCGATCCTTCACTGTTTGGTGGGCTATCGTCTATCTATAGCCGGCAGCTATGGAAATGCACTGGGTATGTTCCCAAAAAGTTTAATTTTCAGTATAGGGAATTTCCCTGCTGGGATGAGAATTCCGCTAGGGAGGAGGAGAATGAGAACCCTATTAATAAAGGGGCGGGAGTTCTATTTTCCTTGTCAAAAGAGAGTATATCGGCCACCCCTATTGCAACTTTAGTTGACATGAGAGCTAGGGAGGGGGGAGATGGTTCTAACCCGAAGAAGTTTTTGAAAGAGATGAAAAAGTGTGATAGTGAAGATGCAGAAGCTATAAGGCGTGCCCAGAACGGCATGAAGAAGGAGAGAAGTTTGCTTCGGTCTGTTATGCATTCAGGTAAGCAGAAAAAAGAGGAGTTAGGAACATCCAGAGATCGCAGTGGGAAGAAGAGGATCAAAACTTCCCACAAAGAGGTAGATCCCAAGAGGAGAACTTCACATACTTCGAAAACAGCATTTACACCTACCAGTGATGCAAAACAATTGGAATTTTATGAAGACAGAGGTCTGAAGAATTCCAAGACAGATACCTGGAGCATAAAGAACAAAACTTTGAGAGACATTGTGGTTCAGGAACACGTTTCAAATAATTACTCTGCTGTGGATACCATTATGGAGGAGCCAAATATCAACTCGGCAACTACTGAGGATTCATCAGAAGCCTTATATCCTGACATGACAAGACATAGTTTTTCAGTTGGACCAGAAATAGCAGAAGAGAAAACTGAAAATAAAGCTCCTTCTGTGGTTGAAATTTCTTCCAGGACTGATGATAACATTTCACCATATTTAAAGAATAATTCTGCCGGAAATGCTTCAGTTAAAGAACAGGAGGGAGATGGCCTGGCAGGTAATAATAATGCAGATGACAGTATAATATTAAGAAGCACAATAAGTCCTGCAGAAGATGATCTTGGTGGTCCTGCACCAGAACCCAAGGATAACCAGGATTCCAAAGATTTTGACTATGAAACGTGTGCTAGCTCAGGACAGAGCAATTTTAAGGTGAAGGGAGAAGAGGATAATGATAATTCTGGGAAGCATTTGGTTTCTCATTCTTCTAGCATGAGTGATCTGAAAAGTGATGAGAAACTGCCTAAACGCAACTCTGATCATGTTAATGATAGTGTGGTGATCAATTCATCCGATGCAAATAAGGTGGAAGACAGTGACAGAAAATCAGAAGCAATCATTGATTGCCATACCAATAATTCTGAGGAATTATCATGTCATTTTTGTCCTGTAATACAAGAAATGGCAGGTTCTGAAGTTCCCACAGAAACCCAAAAGGGTTTTTCAGGAATAGAAGATGGTTCTGGCTATGCTGAAGATCCATCAAAATCTGAAACTACATTGTGTCCTCATAAAATGTTATCAAGTCTTGGGAAGTCATCTTTAAGTTCCTCAACTATGAATTCCAAAATTCCTGCTAGTGACCAAAAATCTGAACAGACCGAAATTCCTAATCCTCTTGTCAAGCATGGAGTAATGGCAGATTGCAACATGTACAATAAGAAAGAAAGTAATCAAAATGATATTGTGAGGGATGAAGTTCCAAGGAAGTCTCAAAAAGAACGTCTGAAATCGTCTTCAAATTCTAATTTGAAAGCAATGCATTCAAGCAAAAGTGCACAAAATTCTGTTTCAAGGCAAGTCAGTGCACATTCAAAAGATCTTGTGAATGGTTCATCTTCTAAGGCATCTTTAGTTCATCCAACTGGAACTAATTTAGGCTCGAGTGAGTCTAATGACTCATTACTACACCAAAAATCTTTACAAGCGCCAAATAAGATTTCATCTTCGGTACCACAGAGAGGTGAAAAGATTAATCAGACAAACTCCCAACCTTCCTCTAAGGTGAACCAGAGTCACGTGCCATCACCTTCACCAACATCTAATTCTCCTGCGATGCTAAGTGATGAGGAGCTTGCACTACTATTGCATCAAGAACTAAATAGTTCTCCCCGAGTTCCTCGTGTACCCCGAGCACGTCATGGGGGCAGCGTGCCACAGCTAACTTCTCCTAGCGGTGCAAGCATACTATCAAAGCGCACATCATCTGCCGGCGGAAAAGATTATTGTTTGTTTTCTAGACGAAAATACAAAGATGCATCTAAAGATGGGATTTGCAGTTCTCGTGAGCTTGAGGATGAAGCTAAAAGGATAGAGAATGCATCATCTTCCTTTGATCAGAAGAATAAAGATATGGAATGTGTGGAAGATGCTTCTGTAATGGAAGAAGGCCACATGTCCATGACAACCATAAATTCTACAGCAAAGAATGTTGCTCCTGCCTCTGCTGCCACTGCAAATAGTAGTTCAGCCTCCCCTCCTGAGGATCGAAATTTGCCATTTATACGCAATTCACCAAAAAATACATCTGATGAAGATTATGGAACTGCTGGAAGGCCAGCCCATCGCACTTTGAGGAACCAGCATGAATGGGCAAGGCTGGGTGATCGTGGTCCAAAGACAAATTCTACTAAGAAAAGGCGAAAGTTGGATGAAGAATCTGATGATAATGTAACTGGCAAGGGCAGAACTGCAAAAGGGGGCGACGGGAAGAATTTTGAGTTGCAGAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCACGGAAGCGCAGGCGTCTGGCTCTTCAGGGAATAGCAGTCAAGGATGCCCGGAGAAGAAAGGCTGATTTGCTAACTGATGATGATGTTGGTCCATTCTCCAATTCTAGTGAGGAGACTGAGTTCAGCGAGGATGAAATTCAGGGCGGCCGAACGGGTCAAGTGGATAGTGAGGCTTCTGCTAGCTCGGACGAGGCAGATAGTGCCTAA 3249 0.4331 MKGRSHRLQSSDPPDDWIDGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFACDKCKSKINRSDTEETEVAQLLAELPTKTVRMENSFAPIGAPRRPFKLWTDIPMEERVHIQGIPGGDPSLFGGLSSIYSRQLWKCTGYVPKKFNFQYREFPCWDENSAREEENENPINKGAGVLFSLSKESISATPIATLVDMRAREGGDGSNPKKFLKEMKKCDSEDAEAIRRAQNGMKKERSLLRSVMHSGKQKKEELGTSRDRSGKKRIKTSHKEVDPKRRTSHTSKTAFTPTSDAKQLEFYEDRGLKNSKTDTWSIKNKTLRDIVVQEHVSNNYSAVDTIMEEPNINSATTEDSSEALYPDMTRHSFSVGPEIAEEKTENKAPSVVEISSRTDDNISPYLKNNSAGNASVKEQEGDGLAGNNNADDSIILRSTISPAEDDLGGPAPEPKDNQDSKDFDYETCASSGQSNFKVKGEEDNDNSGKHLVSHSSSMSDLKSDEKLPKRNSDHVNDSVVINSSDANKVEDSDRKSEAIIDCHTNNSEELSCHFCPVIQEMAGSEVPTETQKGFSGIEDGSGYAEDPSKSETTLCPHKMLSSLGKSSLSSSTMNSKIPASDQKSEQTEIPNPLVKHGVMADCNMYNKKESNQNDIVRDEVPRKSQKERLKSSSNSNLKAMHSSKSAQNSVSRQVSAHSKDLVNGSSSKASLVHPTGTNLGSSESNDSLLHQKSLQAPNKISSSVPQRGEKINQTNSQPSSKVNQSHVPSPSPTSNSPAMLSDEELALLLHQELNSSPRVPRVPRARHGGSVPQLTSPSGASILSKRTSSAGGKDYCLFSRRKYKDASKDGICSSRELEDEAKRIENASSSFDQKNKDMECVEDASVMEEGHMSMTTINSTAKNVAPASAATANSSSASPPEDRNLPFIRNSPKNTSDEDYGTAGRPAHRTLRNQHEWARLGDRGPKTNSTKKRRKLDEESDDNVTGKGRTAKGGDGKNFELQKEEFPKGKRKARKRRRLALQGIAVKDARRRKADLLTDDDVGPFSNSSEETEFSEDEIQGGRTGQVDSEASASSDEADSA 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1290 1082 MobiDBLite consensus disorder prediction 943 1009 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 500 514 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 565 831 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 904 922 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 904 1082 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 671 781 - -
Prci10g1290 1082 Coils Coil 855 875 - -
Prci10g1290 1082 PANTHER UNCHARACTERIZED 952 1068 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 390 417 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 812 829 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 378 535 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 238 290 - -
Prci10g1290 1082 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Prci10g1290 1082 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 652 670 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 1022 1040 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 595 630 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 1066 1082 - -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 238 298 - -
Prci10g1290 1082 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Prci10g1290 1082 SMART PHD_3 25 68 IPR001965 -
Prci10g1290 1082 MobiDBLite consensus disorder prediction 450 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1290 Prci-Chr10 8533267 8539457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1290 24 67 PHD Transcription Factor Family AT5G22260 42.553 8.23e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1290 - - pcin:129322189 2066.97