Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1289 ATGAAAGGGCGCTCGCACCGCCTGCAGAGTTCGGACCCTCCCGACGACTGGATTGATGGTTCCTGGACTGTGGATTGCGTATGCGGTGTGAATTTTGACGATGGGGAAGAGATGGTGAATTGTGACGAGTGCGGTGTGTGGGTGCACACGCGTTGCTCGCGGTATGTCAAAGGAGATGATATGTTTGCATGCGATAAGTGCAAGAGCAAGATTAATCGATCTGATACGGAGGAAACGGAGGTGGCCCAATTGTTAGCCGAGCTCCCTACAAAGACCGTGAGAATGGAGAATTCATTTGCACCCATCGGAGCTCCTCGGCGTCCTTTCAAGCTTTGGACTGACATACCTATGGAGGAGAGGGTGCACATTCAAGGAATTCCAGGTGGCGATCCTTCACTGTTTGGTGGGCTATCGTCTATCTATAGCCGGCAGCTATGGAAATGCACTGGGTATGTTCCCAAAAAGTTTAATTTTCAGTATAGGGAATTTCCCTGCTGGGATGAGAATTCCGCTAGGGAGGAGGAGAATGAGAACCCTATTAATAAAGGGGCGGGAGTTCTATTTTCCTTGTCAAAAGAGAGTATATCGGCCACCCCTATTGCAACTTTAGTTGACATGAGAGCTAGGGAGGGGGGAGATGGTTCTAACCCGAAGAAGTTTTTGAAAGAGATGAAAAAGTGTGATAGTGAAGATGCAGAAGCTATAAGGCGTGCCCAGAACGGCATGAAGAAGGAGAGAAGTTTGCTTCGGTCTGTTATGCATTCAGGTAAGCAGAAAAAAGAGGAGTTAGGAACATCCAGAGATCGCAGTGGGAAGAAGAGGATCAAAACTTCCCACAAAGAGGTAGATCCCAAGAGGAGAACTTCACATACTTCGAAAACAGACAGAGGTCTGAAGAATTCCAAGACAGATACCTGGAGCATAAAGAACAAAACTTTGAGAGACATTGTGGTTCAGGAACACGTTTCAAATAATTACTCTGCTGTGGATACCATTATGGAGGAGCCAAATATCAACTCGGCAACTACTGAGGATTCATCAGAAGCCTTATATCCTGACATGACAAGACATAGTTTTTCAGTTGGACCAGAAATAGCAGAAGAGAAAACTGAAAATAAAGCTCCTTCTGTGGTTGAAATTTCTTCCAGGACTGATGATAACATTTCACCATATTTAAAGAATAATTCTGCCGGAAATGCTTCAGTTAAAGAACAGGAGGGAGATGGCCTGGCAGGTAATAATAATGCAGATGACAGTATAATATTAAGAAGCACAATAAGTCCTGCAGAAGATGATCTTGGTGGTCCTGCACCAGAACCCAAGGATAACCAGGATTCCAAAGATTTTGACTATGAAACGTGTGCTAGCTCAGGACAGAGCAATTTTAAGGTGAAGGGAGAAGAGGATAATGATAATTCTGGGAAGCATTTGGTTTCTCATTCTTCTAGCATGAGTGATCTGAAAAGTGATGAGAAACTGCCTAAACGCAACTCTGATCATGTTAATGATAGTGTGGTGATCAATTCATCCGATGCAAATAAGGTGGAAGACAGTGACAGAAAATCAGAAGCAATCATTGATTGCCATACCAATAATTCTGAGGAATTATCATGTCATTTTTGTCCTGTAATACAAGAAATGGCAGGTTCTGAAGTTCCCACAGAAACCCAAAAGGGTTTTTCAGGAATAGAAGATGGTTCTGGCTATGCTGAAGATCCATCAAAATCTGAAACTACATTGTGTCCTCATAAAATGTTATCAAGTCTTGGGAAGTCATCTTTAAGTTCCTCAACTATGAATTCCAAAATTCCTGCTAGTGACCAAAAATCTGAACAGACCGAAATTCCTAATCCTCTTGTCAAGCATGGAGTAATGGCAGATTGCAACATGTACAATAAGAAAGAAAGTAATCAAAATGATATTGTGAGGGATGAAGTTCCAAGGAAGTCTCAAAAAGAACGTCTGAAATCGTCTTCAAATTCTAATTTGAAAGCAATGCATTCAAGCAAAAGTGCACAAAATTCTGTTTCAAGGCAAGTCAGTGCACATTCAAAAGATCTTGTGAATGGTTCATCTTCTAAGGCATCTTTAGTTCATCCAACTGGAACTAATTTAGGCTCGAGTGAGTCTAATGACTCATTACTACACCAAAAATCTTTACAAGCGCCAAATAAGATTTCATCTTCGGTACCACAGAGAGGTGAAAAGATTAATCAGACAAACTCCCAACCTTCCTCTAAGGTGAACCAGAGTCACGTGCCATCACCTTCACCAACATCTAATTCTCCTGCGATGCTAAGTGATGAGGAGCTTGCACTACTATTGCATCAAGAACTAAATAGTTCTCCCCGAGTTCCTCGTGTACCCCGAGCACGTCATGGGGGCAGCGTGCCACAGCTAACTTCTCCTAGCGGTGCAAGCATACTATCAAAGCGCACATCATCTGCCGGCGGAAAAGATTATTGTTTGTTTTCTAGACGAAAATACAAAGATGCATCTAAAGATGGGATTTGCAGTTCTCGTGAGCTTGAGGATGAAGCTAAAAGGATAGAGAATGCATCATCTTCCTTTGATCAGAAGAATAAAGATATGGAATGTGTGGAAGATGCTTCTGTAATGGAAGAAGGCCACATGTCCATGACAACCATAAATTCTACAGCAAAGAATGTTGCTCCTGCCTCTGCTGCCACTGCAAATAGTAGTTCAGCCTCCCCTCCTGAGGATCGAAATTTGCCATTTATACGCAATTCACCAAAAAATACATCTGATGAAGATTATGGAACTGCTGGAAGGCCAGCCCATCGCACTTTGAGGAACCAGCATGAATGGGCAAGGCTGGGTGATCGTGGTCCAAAGACAAATTCTACTAAGAAAAGGCGAAAGTTGGATGAAGAATCTGATGATAATGTAACTGGCAAGGGCAGAACTGCAAAAGGGGGCGACGGGAAGAATTTTGAGTTGCAGAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCACGGAAGCGCAGGCGTCTGGCTCTTCAGGGAATAGCAGTCAAGGATGCCCGGAGAAGAAAGGCTGATTTGCTAACTGATGATGATGTTGGTCCATTCTCCAATTCTAGTGAGGAGACTGAGTTCAGCGAGGATGAAATTCAGGGCGGCCGAACGGGTCAAGTGGATAGTGAGGCTTCTGCTAGCTCGGACGAGGCAGATAGTGCCTAA 3204 0.4345 MKGRSHRLQSSDPPDDWIDGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFACDKCKSKINRSDTEETEVAQLLAELPTKTVRMENSFAPIGAPRRPFKLWTDIPMEERVHIQGIPGGDPSLFGGLSSIYSRQLWKCTGYVPKKFNFQYREFPCWDENSAREEENENPINKGAGVLFSLSKESISATPIATLVDMRAREGGDGSNPKKFLKEMKKCDSEDAEAIRRAQNGMKKERSLLRSVMHSGKQKKEELGTSRDRSGKKRIKTSHKEVDPKRRTSHTSKTDRGLKNSKTDTWSIKNKTLRDIVVQEHVSNNYSAVDTIMEEPNINSATTEDSSEALYPDMTRHSFSVGPEIAEEKTENKAPSVVEISSRTDDNISPYLKNNSAGNASVKEQEGDGLAGNNNADDSIILRSTISPAEDDLGGPAPEPKDNQDSKDFDYETCASSGQSNFKVKGEEDNDNSGKHLVSHSSSMSDLKSDEKLPKRNSDHVNDSVVINSSDANKVEDSDRKSEAIIDCHTNNSEELSCHFCPVIQEMAGSEVPTETQKGFSGIEDGSGYAEDPSKSETTLCPHKMLSSLGKSSLSSSTMNSKIPASDQKSEQTEIPNPLVKHGVMADCNMYNKKESNQNDIVRDEVPRKSQKERLKSSSNSNLKAMHSSKSAQNSVSRQVSAHSKDLVNGSSSKASLVHPTGTNLGSSESNDSLLHQKSLQAPNKISSSVPQRGEKINQTNSQPSSKVNQSHVPSPSPTSNSPAMLSDEELALLLHQELNSSPRVPRVPRARHGGSVPQLTSPSGASILSKRTSSAGGKDYCLFSRRKYKDASKDGICSSRELEDEAKRIENASSSFDQKNKDMECVEDASVMEEGHMSMTTINSTAKNVAPASAATANSSSASPPEDRNLPFIRNSPKNTSDEDYGTAGRPAHRTLRNQHEWARLGDRGPKTNSTKKRRKLDEESDDNVTGKGRTAKGGDGKNFELQKEEFPKGKRKARKRRRLALQGIAVKDARRRKADLLTDDDVGPFSNSSEETEFSEDEIQGGRTGQVDSEASASSDEADSA 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1289 1067 MobiDBLite consensus disorder prediction 781 812 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 363 416 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 587 615 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 435 449 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 1051 1067 - -
Prci10g1289 1067 Coils Coil 840 860 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 656 764 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 633 764 - -
Prci10g1289 1067 PANTHER UNCHARACTERIZED 937 1053 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 797 812 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 238 302 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 428 505 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 1007 1025 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 637 655 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 485 499 - -
Prci10g1289 1067 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Prci10g1289 1067 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 375 402 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 587 617 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 891 1067 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 891 907 - -
Prci10g1289 1067 MobiDBLite consensus disorder prediction 928 994 - -
Prci10g1289 1067 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Prci10g1289 1067 SMART PHD_3 25 68 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1289 Prci-Chr10 8533267 8539457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1289 24 67 PHD Transcription Factor Family AT5G22260 42.553 8.09e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1289 - - pcin:129322189 2026.91