Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1262 ATGGGAAGAATGGGAGGGAATCGCAGCAATTACTCTGCCAATCCTTCTGATTACAAGCTTCTTGAAGAGGTTGGTTATGGTGCTAGCGCCACCGTTTACCGTGCGATCTATATTCCTCTCAATGAACTCGTCGCTGTCAAGTGCTTGGATCTCGATCGCATCAATTCCAATCTGGATGACATACGGAGGGAGGCTCAAACTATGAGTTTGATTGATCACCCTAATGTTGTGAGGGCATATTGTTCATTTGTTGTTGAGCGGAATCTTTGGGTGGTCATGCCATTCATGGATGAAGGTTCTTGTTTACACCTCATGAAAATAGCATATCCTGATGGATTTGAAGAGGCAGCTATTGGATCTATTCTAAAAGAAACTCTCAAGGCATTGGAGTACCTTCATCAACAAGGGCATATCCATCGTGATGTCAAGGCTGGAAACATTTTACTTGATAGTAAAGGGATTGTGAAGCTCGCTGACTTTGGTGTTTCAGCTTGCATGTTTGATACTGGTGATAGGCAGCGTTCGAGAAATACTTTCGTGGGGACTCCTTGCTGGATGGCACCAGAGGTACTGCAACCAGGAAGCGGCTACAATTTCAAGGCTGATATTTGGTCTTTTGGAATTACGGCATTGGAATTGGCTCATGGTCACGCTCCTTTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACCATCCAAAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAATTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTCAAAGATCAAACAAAGAGGCCATCAGCGGAGAAGTTGTTGAAACACTCCTTCTTTAAAAACGCTAAGCCTCCTGAACTTTCTGTGAAGAAATTATTTGCTGATTTACCACCTCTTTGGAATCGTGTGAAAGCTCTTCAGCTTAAAGATGCAGCTCAACTAGCTCTGAAGAGAATGCCTTCTGCAGAACAAGAAGCATTATCACAGAGTGAATATCAGCGAGGAGTTAGTGCATGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTAAGGGATGATGATGATGATATTTTGGAGATGAGGGAAGAAGATGAAAACAAGTTCTTTACCAATTATAAGGATACAAATGATTCCCAGTCTGGTATAGGGAAAAAGAATTCTGATAATTTTCCCCAGGATGAGTTCACATCACTACCAGACAGTAATGACATGAAACAGAGTGAGAGCTTGGACAAAAAGGGTAAGATTGTTGAAAGTGATCTTCAGGAACTTGTCTTCTAAAATATTATTTGGAAAAGAAATGGATCACTTTCTGAGGCAACATCATCCACATTGGAGAAGGATATTGGGACAAGCAGGACTAGATCTCAATCAGTGAAAAGTCGTCAGAGCCAAAGTGGGCCTCTGGTGCCAGGAACTGTGTTTGGTCATTCTTCATCAGAAAGAGTACGTACCTCAGAAAGGTATCCATCGAGTGAGAAAGTTAATCGGGAAGTACGAAAAATTCCAAGCTTTAGTGGTCCTTTGATGCTGCCAAACCGAGCTTCGGCAAATAGTTTATCAGCTCCAATAAAATGTTCAGGAGGATTCAGAGATTCATTGGATGATAAATCAAAGACTAATCTTGTGCAGATTAAAGGGCGATTCTCAGTAACATCAGAAAATTTAGATCTTGTGAAGGATATTCCTATAAGTTCAGTTCCACGCCGATCTTCACAGGGATCACCACTGCGGAAATCTGCCAGTGTTGGTGATTGGATGGTGGATTTTAGACAAATGCCAACGGGTCAATCTGCCAAAGATTCTGCCAATATTCCTGCATCACTTTTGACGGCTCACCTTCAGAATCTTTTCCAGCAGACAATTATTCAACAGGATCTTATAATGACTTTGTTAAATAGCATGCAGCCAGCTGATGCGGTTGATGCTTCTTTGAATGGAAAGTCACCGCCTCCAGCATATTGCAGTTCAGAGAACAATGGAATTGTTGATTCAGCAGCTTCGGATAGGGAACGTCTGCTGCTGGACAAAATTGCAGAACTACAAGCCAGGTTCATCAGTTTGACAGAGGAATTGACTGCTGAGAAGTTGAAACAGATACAGTTGCAACAACAGCTAACGTCTCTCTCCAGTCAGGATCATGGGGACATAAGGGAAGAAGTAGCATGA 2178 0.4192 MGRMGGNRSNYSANPSDYKLLEEVGYGASATVYRAIYIPLNELVAVKCLDLDRINSNLDDIRREAQTMSLIDHPNVVRAYCSFVVERNLWVVMPFMDEGSCLHLMKIAYPDGFEEAAIGSILKETLKALEYLHQQGHIHRDVKAGNILLDSKGIVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKRMPSAEQEALSQSEYQRGVSAWNFDIDDLKAQASLVRDDDDDILEMREEDENKFFTNYKDTNDSQSGIGKKNSDNFPQDEFTSLPDSNDMKQSESLDKKGKIVESDLQELGXFXNIIWKRNGSLSEATSSTLEKDIGTSRTRSQSVKSRQSQSGPLVPGTVFGHSSSERVRTSERYPSSEKVNREVRKIPSFSGPLMLPNRASANSLSAPIKCSGGFRDSLDDKSKTNLVQIKGRFSVTSENLDLVKDIPISSVPRRSSQGSPLRKSASVGDWMVDFRQMPTGQSAKDSANIPASLLTAHLQNLFQQTIIQQDLIMTLLNSMQPADAVDASLNGKSPPPAYCSSENNGIVDSAASDRERLLLDKIAELQARFISLTEELTAEKLKQIQLQQQLTSLSSQDHGDIREEVA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1262 726 SUPERFAMILY Protein kinase-like (PK-like) 16 334 IPR011009 -
Prci10g1262 726 MobiDBLite consensus disorder prediction 375 407 - -
Prci10g1262 726 MobiDBLite consensus disorder prediction 371 417 - -
Prci10g1262 726 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Prci10g1262 726 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Prci10g1262 726 MobiDBLite consensus disorder prediction 446 484 - -
Prci10g1262 726 CDD STKc_OSR1_SPAK 16 279 - -
Prci10g1262 726 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1262 726 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1262 726 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Prci10g1262 726 Gene3D Transferase(Phosphotransferase) domain 1 99 327 - -
Prci10g1262 726 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1262 726 Coils Coil 682 702 - -
Prci10g1262 726 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 700 IPR047173 GO:0043539
Prci10g1262 726 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Prci10g1262 726 MobiDBLite consensus disorder prediction 446 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1262 Prci-Chr10 8339181 8348396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1262 11 718 MAP Kinase Kinase Kinase Kinase AT4G10730 63.752 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Prci10g1262 Pkinase 1.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1262 - - qsa:O6P43_034381 1089.72