Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1258 ATGGATTCCGGCGTTGGTTTGTCTGTTGGCAAGTTTGAGACCGATGATGCTGATGTTGTGGAGAAAGATCCTACTGGACGTTACATTCGGTATGATGATATGTTGGGGAAAGGAGCATTCAAGACTGTATACAAGGCGTTTGATGAAGTTGATGGAACAGAAGTTGCCTGGAACCAAGTAAACATTGAGGACGTTTTGCAGTCTCCACAACAATTGGAAAGGTTATATTCTGAGGTTCATCTCCTAAAGTCATTGAAACATGGCAACATCATCAAGTTCTATAATTCTTGGGTGGACGATACAAACAAGACTATTAACATGATAACTGAGTTATTCATCTCTGGGAGTTTGAGGCGATATAGAAGAATGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCGAGGTTTATGCTATTTGCATAGCCTCGATCCTCCTATCATCCATAGAGATTTGAAATGTGATAATATTTTTATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGATTGGCAACTGTCCTACAGCAACCTACTGCACGGAGTGTCATTGGGACACCAGAATTCATGGCTCCTGAGCTTTATGAAGAAGAGTATAATGAACTTGTTGACGTATATTCTTTTGGAATGTGCATGTTAGAAATGATCACCTGTGAGTACCCATATAGTGAATGCAAAAATCAGGCACAGATATATAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCCCTTGGTAAAGTGAATGATCCACAAGTGAAGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTATGAGAGTGCCTGCATCCGAGCTATTGAAGGATCCATTTCTTGCTACTGACAACATGAAGGAGATCAACCATGTACTGCAGTTGCCCAATCACATAACCAAGTTGGTGATGCCACCAACAACTGAGCCACGTCCCATGGAGATAGACCAAACTGTCAACGATGTTTTACCTGGCTCCTGTTTGAACGGTACAGAAGAAACTCAAATATCAACTCTAGAGTTCCTTAGGCAGAATAAGAGTAATGAATTTAGGTTACGAGGGGAGAAAAACGTTGCAGGCAGAACAATTTCACTTACTCTACGCATTGCTGAGACAAACGGTTGTGCGAGGAATATCCACTTTCTGTTCTATCTTGATTCGGATACGGCAATTTCAATTGCTGAGGAGATGGTAGAAAATCTGGATCTCACTGCTGAGGATGTGGATGTTATTGCTGAACTAATACACACCATGACCGTCAGGCTTGTTCCTAACTGGAGAGAGTCACGTCAACAATTACCTGGAGCATATTGTTTGGATGGCGATTCTCCTGTAGTTTTAAATGGGGAATCATCTTTATGGTGTCATAGTGATGAGAATCTTGTTAACTCACAGGTTCTTGATGAAGATCAAGAGAAACAGGAATCAATTATGTCAGGCATTTCAGCAGAGGATGGGATTAAAGTCATCTCAGATGGTAAAAACATGGAACCTGCTTCTGTTATCTTCGATGGATGCTGTGAGGACTCCATTGCCAAAAGATCCAATTTAGATGTCAGGTTCCATGATCAAGATGAACGCAAGAGGGAAGTTAATGCTGGTGGATCTGTTACCATCAACGGGTCTGATAGGAACTCAGTGAACGTCGTTTCAGAGAACTCAACTGTCTCATTTATAGATTCATGTGGCGATGAACCCCAGAACTTTGACATGTCAAGCATCAATACTCTTTCCCTCGCAGACAAGGATCAATGTGACGAGCTGCAACTGGAGCTTGATGCAATAAATACACAGTATCACCAATGCTTCCTTGAACTTGCCAAGATGAGGGAGGATGCCATAGAAGACGCAAAAAGGAGATGGATTACGAGGAAGAAAATACCAGTCATGTGA 1908 0.414 MDSGVGLSVGKFETDDADVVEKDPTGRYIRYDDMLGKGAFKTVYKAFDEVDGTEVAWNQVNIEDVLQSPQQLERLYSEVHLLKSLKHGNIIKFYNSWVDDTNKTINMITELFISGSLRRYRRMHKNVELKAIKNWARQILRGLCYLHSLDPPIIHRDLKCDNIFINGNTGEVKIGDLGLATVLQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMITCEYPYSECKNQAQIYKKVTSGIKPAALGKVNDPQVKQFIEKCLVPASMRVPASELLKDPFLATDNMKEINHVLQLPNHITKLVMPPTTEPRPMEIDQTVNDVLPGSCLNGTEETQISTLEFLRQNKSNEFRLRGEKNVAGRTISLTLRIAETNGCARNIHFLFYLDSDTAISIAEEMVENLDLTAEDVDVIAELIHTMTVRLVPNWRESRQQLPGAYCLDGDSPVVLNGESSLWCHSDENLVNSQVLDEDQEKQESIMSGISAEDGIKVISDGKNMEPASVIFDGCCEDSIAKRSNLDVRFHDQDERKREVNAGGSVTINGSDRNSVNVVSENSTVSFIDSCGDEPQNFDMSSINTLSLADKDQCDELQLELDAINTQYHQCFLELAKMREDAIEDAKRRWITRKKIPVM 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1258 635 Gene3D Transferase(Phosphotransferase) domain 1 113 294 - -
Prci10g1258 635 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Prci10g1258 635 CDD STKc_WNK 27 286 - -
Prci10g1258 635 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1258 635 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Prci10g1258 635 Gene3D - 366 446 - -
Prci10g1258 635 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1258 635 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1258 635 SUPERFAMILY Protein kinase-like (PK-like) 31 329 IPR011009 -
Prci10g1258 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Prci10g1258 635 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 422 IPR024678 GO:0004674|GO:0005524
Prci10g1258 635 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 523 - -
Prci10g1258 635 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1258 Prci-Chr10 8315631 8319016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1258 1 634 MAP Kinase Kinase Kinase AT5G41990 52.830 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci10g1258 Pkinase 8.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1258 K08867 - qsa:O6P43_024088 780.785