Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1256 ATGGGTGAGACTCAGATGGGTTCCTCGCTTTGGAATAGTCTCAAATGCCTTTGTTCTGCTCACGGTTGGTCTTACGCCATTTTCTGGCGCTCTCATCCTCCTAATTCCTTGTTCCTGTCTGTGGAAGATGCTTACTACGAAGGGCTATTAGGACAAGAGATTATTAAGACTCTTCCACAGCTTCAGTTCCTGGGCGAAGGAATTGTTGGTCATGTTGCTTTTACTGGCAAGCCCAGTTGGATTTTCTCAGATGCTCAATCCCAAGAATGGAATTTAACAGGTGTCTTTTGGGGTCTAGATCATTGTGAGCTTGATTCTGAACTGCGTCAACAATTCTCCCATGGGATAAAGACAATAGCAGTGATATCTGTTAAACCATTAGGAGTAGTACAATTTGGATCCACAGAGAAGATCTTGGAAAGAGAGGAAATTTTTGAGCAAACACAAAGACTGCTCATGGAGAATGACTATTTGGATACAGTTGATGAGCCAGAAAAAATGGTTTTACCTTGGGATTTTGAAAATTATGACCTGAATGGGTTGTTGACCTCTGAAAACTTGTGCTCTTGGAATCTCAACCATGAAGATCACAATAACATCAATGAGCAGATTAGAGATTGCTATTTTTCCTCAAGCATGGATAATTCTCTCCTTTCCACTTACAAGAATCAAGAAAATGGAATGACCAGCTTGCATGGGGAATCTTCTTGTCTTAGCGATCAATTGACAACAGGAGCAGAAGCTCAAATGGTATTGTCAGAGAAGGATAGTTTTGAAGTGCTTTTGAATCCTAAATCCTGTGTGAAAAACCCCTGTTTTGGCCCACAGAGCAGTGAAGCTTCTTTGGCTTCATCAATGGCTTGGGATATTTCTGTCCAGGATTCAGCATTGACCTCTTTGTACAGCGTGAACCGAAGCATGCTTGGATCAGGAGGATCATTTCAAGACAAATTATGGAATCCACTTGAATACAACGCTTTTGCTCAATCACTGCATGGACTGTCGAAGATGTCAACAGAGGACTTGTCTGACTTGTGCTCCGTGGATGACATTTGTCAGAGGTTTGCATCTTCTCCAGAACATAGCACCTGTGCAACAAATACTGCATTGGAAAATTCTCTTTCTAAGTCCTTAGAATTCAATAATCCCACTTGTGTTGCCTTTAATGGTGATCCAGCCAAAAGTATTTCAGATGGACACCCAACATCTACCCTTATGCATACTTTTGAAAGCAGCAGTGCACTTGATTTTGTTGGTGAGTGCTGGGGGAATATGATTGCACCAGTGATGAAATCTGCTACCATTACTGCTTCATCTGAATGCAGATCAGGGTTGAATATTGTTACACCTAATGCCACCAAGAAGGGATTATTTGCAGAGCTTGGCATTGAAGAGCTTCTGAATGGTGGATCCAGTTTCGAGGATCAAATATCTACAACTAAAAGGCGAAGGACAGATTCATCTGGGAACACTAATCCTGTTTCCAACTTGGACAAGACAAACAATCTTGTATGCAAGAAAGAGACATTTCCTAAATCACTGGTAGGGTCATGGTTGGACCATGGTCCTTGCTTCAATGGTGCGAAGGTTGTTCCTCAAAAGCCAGAGGAATCCACAAAGGCCTCCAAGAAGAGGGCTAGGCCTGGTGAGAGTACCCGACCGCGACCAAAAGATCGTCAGCAGATCCAAGACCGTATTAAAGAGTTGAGAGGGATCATCCCCAGTGGTGGAAAGTGTAGCATTGACTCTTTGTTGGATCGCACCATCAAATACATGCTTTTCTTACAAAGCGTCACAAAATATGCAGGAAAACTGCAAGAACCTAAAAGTCCTAAGCTCATTGAGGAGGGAAACAGTATGGTTGTGAAGAACAAAAGTGTGGAAGAATCAGATACCAAGGATGGTGGTGGGGTTACATGGGCATTTGAAGTTGCAGGCCAAACAATGGCATGCCCCATTATAGTGGAGGACATGAGCCAACCAGGCCAAATGCTCATAGAGATGCTTTGTGAGGAGCAAGGCTTGTTCCTTGAGATAGCCGAAATAATCCGCGGATTTGGACTGAATATTCTGAAAGGAAAGATGGAAATTAGGGAGAACAAGTTATGGGGACGCTTCATTGTTGAGGCTAGCAGAAATGTAACAAGGATAGATGTATTTTGGTATCTGGTTCAACTTCTACCGCAATCTGGAACAGATAGTTATCAGAAAACAGAGATGGCACTTCCTGCTATGGCCATGACGTGA 2247 0.4281 MGETQMGSSLWNSLKCLCSAHGWSYAIFWRSHPPNSLFLSVEDAYYEGLLGQEIIKTLPQLQFLGEGIVGHVAFTGKPSWIFSDAQSQEWNLTGVFWGLDHCELDSELRQQFSHGIKTIAVISVKPLGVVQFGSTEKILEREEIFEQTQRLLMENDYLDTVDEPEKMVLPWDFENYDLNGLLTSENLCSWNLNHEDHNNINEQIRDCYFSSSMDNSLLSTYKNQENGMTSLHGESSCLSDQLTTGAEAQMVLSEKDSFEVLLNPKSCVKNPCFGPQSSEASLASSMAWDISVQDSALTSLYSVNRSMLGSGGSFQDKLWNPLEYNAFAQSLHGLSKMSTEDLSDLCSVDDICQRFASSPEHSTCATNTALENSLSKSLEFNNPTCVAFNGDPAKSISDGHPTSTLMHTFESSSALDFVGECWGNMIAPVMKSATITASSECRSGLNIVTPNATKKGLFAELGIEELLNGGSSFEDQISTTKRRRTDSSGNTNPVSNLDKTNNLVCKKETFPKSLVGSWLDHGPCFNGAKVVPQKPEESTKASKKRARPGESTRPRPKDRQQIQDRIKELRGIIPSGGKCSIDSLLDRTIKYMLFLQSVTKYAGKLQEPKSPKLIEEGNSMVVKNKSVEESDTKDGGGVTWAFEVAGQTMACPIIVEDMSQPGQMLIEMLCEEQGLFLEIAEIIRGFGLNILKGKMEIRENKLWGRFIVEASRNVTRIDVFWYLVQLLPQSGTDSYQKTEMALPAMAMT 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1256 748 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 546 595 IPR011598 GO:0046983
Prci10g1256 748 MobiDBLite consensus disorder prediction 536 561 - -
Prci10g1256 748 MobiDBLite consensus disorder prediction 474 498 - -
Prci10g1256 748 MobiDBLite consensus disorder prediction 527 561 - -
Prci10g1256 748 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 59 150 IPR025610 -
Prci10g1256 748 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 559 601 IPR036638 GO:0046983
Prci10g1256 748 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 6 735 IPR043561 GO:0003700|GO:0006355
Prci10g1256 748 MobiDBLite consensus disorder prediction 483 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1256 Prci-Chr10 8294133 8298211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1256 463 730 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 43.509 9.06e-64 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1256 - - pcin:129323080 1516.52