Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1253 ATGTCAGCTTCAGGTATCGCAGATTCTCCATCTTCTTTCCCTTTGGACCATGGCCTTGTGAAGCCTTCAATCCCTCTCGTCTCTTTTCTCGAACGCCTGCAAGAAACAGCGGTAAACACCTTCGGCAAATCTAACGTCGACGCAAAAACCTACGTTGACGTGTCGTTGAAGTTCAACTTGTCTGAGACAGAGGAGGCATTTGATAAGCTTGCTAGGTCTGCTAATGGCTCTGTACCAGCCAAGGAGTTGAATGATTTTATAGAAAGATACTTGAATGGTGCAGAGGACGACATGGAGCAATGCGAACCAGAGGATTTCGTAGAAGAGCCAGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCATTGAAGGTCCATTCCCTTTGGAAAAACTTGAGTCGCAGGGTATCCAGTCGGGTCAAAAGCCATCCCCATTTGCATACTCTACTTCCTTTGCCTGCTTCTTTTGTCATTCCTGGTTCACGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGATAATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACGGCAATTGTGACTAATCTCATTTCTTTGGTTGACGAATATGGATTTGTGCCTAATGGTGCAAGAGCCTACTACACCCATAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATTTATGAGATCTACAGTACCACTGGTGATATAGAACTGGTCAAAAGATCACTTCCTGCACTAAGGAAAGAGTATGAGTTTTGGAATTCAGAAATACATAGAGTGACCATTATGGATCCTCAAGGTTGCACTCATACCTTAAATCGTTACTATGCGATGTGGAATAAACCCAGGCCAGAGGGTTCAGTGAAGGACAAGGCATTTGCTTCCAAGGTTTTGGATGTTCCAGAAAAACAGAACTTTTACCGTGAAGTTGCTACAACTGCCGAATCAGGGTGGGATTTTAGCACCAGATGGATGAGAGATCCGCTAGAGTTTACATCAGTGGCTACAACTTCTGTAATACCTGTTGATCTAAATGCATATATTCTTGGGATGGAACTTAATATTGCATTTTTTGCAAAAGTTACCGGAGATAATAGCACTGCTCATCACTTCCTGCAACTTTCTGATAGTAGAAAGAAGGCACTTAACTCTGTTTTCTGGGACGTAAACATGAAACAATGGCTTGATTACTGGCTCACAGATAGTATATGCCAGCAGAATCACAGTGTATTTGCTTCCAACTTTGTTCCTTTATGGATGGAACCATTTTACTCAGATTCTTTGATTGTGGGGAGCGTTGTTGAAAGTCTCAAGACTTGTGGGCTTGTTCGTGCTGCTGGAGTTGCAACCTCTTTGACAAATTCAGGACAACAGTGGGACTTCCCAAATGGCTGGCCCCAAATTCAACATATGATAGTTGAAGGTCTGGTGAGATCTGGGTTGAAAGAAGCAGCCTCACTGGGAGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATCGCCTACAAGAAAACAGGGGTGATGCATGAAAAATATAATGTGGAGCATTTTGGCGAGTTTGGAGGTGGTGGAATATATGAGCCCCAGACTGGTTTTGGGTGGTCTAACGGAGTAGTGCTTGCTTTCTTGGAGGAGTTTGGATGGCCTCGAGATCTCCATATTGAGTGTTCATCGATTTCCTCAGAATTTGACAACATTGACAGTTGA 1719 0.4398 MSASGIADSPSSFPLDHGLVKPSIPLVSFLERLQETAVNTFGKSNVDAKTYVDVSLKFNLSETEEAFDKLARSANGSVPAKELNDFIERYLNGAEDDMEQCEPEDFVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSSRVKSHPHLHTLLPLPASFVIPGSRFREVYYWDSYWIIRGLLVSKMYKTATAIVTNLISLVDEYGFVPNGARAYYTHRSQPPLLSAMIYEIYSTTGDIELVKRSLPALRKEYEFWNSEIHRVTIMDPQGCTHTLNRYYAMWNKPRPEGSVKDKAFASKVLDVPEKQNFYREVATTAESGWDFSTRWMRDPLEFTSVATTSVIPVDLNAYILGMELNIAFFAKVTGDNSTAHHFLQLSDSRKKALNSVFWDVNMKQWLDYWLTDSICQQNHSVFASNFVPLWMEPFYSDSLIVGSVVESLKTCGLVRAAGVATSLTNSGQQWDFPNGWPQIQHMIVEGLVRSGLKEAASLGEEIARRWITTNYIAYKKTGVMHEKYNVEHFGEFGGGGIYEPQTGFGWSNGVVLAFLEEFGWPRDLHIECSSISSEFDNIDS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1253 572 PRINTS Glycosyl hydrolase family 37 signature 454 470 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 PRINTS Glycosyl hydrolase family 37 signature 275 292 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 PRINTS Glycosyl hydrolase family 37 signature 342 359 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 PRINTS Glycosyl hydrolase family 37 signature 205 223 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 PRINTS Glycosyl hydrolase family 37 signature 385 401 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 PRINTS Glycosyl hydrolase family 37 signature 534 547 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 PRINTS Glycosyl hydrolase family 37 signature 310 327 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 Gene3D - 33 559 IPR012341 GO:0005975
Prci10g1253 572 PANTHER TREHALASE 23 564 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 Pfam Trehalase 45 551 IPR001661 GO:0004555|GO:0005991
Prci10g1253 572 SUPERFAMILY Six-hairpin glycosidases 46 553 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1253 Prci-Chr10 8259496 8263896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1253 16 560 Trehalose Biosynthesis Gene Families AT4G24040 56.553 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1253 K01194 - gmx:547539 835.484