Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1251 ATGTCCGCTTCTCGCATCGCAGAATCTTCATCTGCTTGTTCTTTGGACCCAGACCTCGGGAAACCCTCAAACCCTCTTGTCTCCTTCCTCGAACGTTTGCAGGAAACCGCTTTAATCACTTTGGGCAAATCTAAATTCGATGCAAAAACATATGTGGACTTGCCATTGAAGTTCAGCTTGTCTGAGACAGAGGAGGCATTTGATCAACTTGCTAGGTCTGCTAACGGCTCTGTACCTGCCGAGGAGTTCAAAGGTTTTATAGAAAGATACTTTGATGGTGCAGGGGACGATGTGGTGAACTACGAACCAGAGGATTACGTAGCAGAGCCCGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAGTTGAGGGCATGGGCATTGAAGGTTCATTCCCTTTGGAAAAACTTGAGTCGCAGAGTATCAAGTGGGGTCAAAAGTCATCCCCATTTGCGTACTCTGCTTCCTTTGCCAGCTTCTTTTGTCATTCCTGGTTCACGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGGTCATCAGGGGTTTACTGGTGAGTAAAATGTACAAGACAGCCACGGCAATCGTGACTAATCTTATTTCATTAATAGAGGATTATGGGTTTGTGCTTAATGGTGCAAGAGCCTACTACACTAACAGAAGCCAACCTCCCCTTTTAAGTTCTATGATTTATGAGATTTACAACAGCACTGGTGATATAGAGTTGGTCAAAAGATCGCTTCCTGCACTACAGAAAGAATATGAATTTTGGAATTCAGACATGCATAGGGTGACCATTGTGGATGCTCAAGGTCGCACTCACACCTTAAATCGTTATTATGCAAAGTGGAATAAACCCAGGCCAGAGTCTTCAATAAACGACAAGGCATTTTCTTCCAAGTTTTTGAATGTTTCAGAAAAACAGCACTTTTACCGTGAAGTGGCTTCAACTGCTGAATCAGGATGGGATTTTAGCACAAGATGGATGAGAGATCCTTCAGATTTTACCACATTGGCGACAACAGCAGTAGTACCTGTTGATCTAAATGCTTTTATACTAGGGATGGAACTTAATATTGCATTTTTAGCTGAAGTTACTGGAGATGATTGCACTGCTCAGCACTTCCTGCAACTTGCTGATTCTAGAAAGAAGGCGTTCAACTCTGTTTTCTGGAACAAAAGTAAGAAACAATGGCTTGATTATTGGCTCACAAGTAGTACATGTCAGGAAGCTCAAGTATGGAATGCTCACCAGCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTATGGATGGAACCATTTTACTCAGACTCGTCGGTTGTGGGTAGCGTTGCCGAAAGCCTCAAAACCAGTGGGCTGCTTGGTGCTGCTGGAATTGCAACCTCTTTGACGAATTCAGGACAACAGTGGGACTTTCCAAATGGCTGGGCCCCACTTCAACATATGATAGTAGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCACTGGGGCAAGAAATTGCAAGGAGATGGATCGCAACCAATTATATCACCTACAAGAAATCGGGGCTCATGCATGAAAAATATAATGTGGAGCATTGTGGAGAGTTTGGAGGTGGGGGTGAATATTCAACCCAGACTGGTTTTGGGTGGTCGAACGGAGTGGTGCTTGCTTTCTTGGACGAGTTTGGATGGCCGCGACATCTCGATATTGACTGCTCATCGATTCCCTCTGAAATTCACAGCACTCGCAACTGA 1746 0.4416 MSASRIAESSSACSLDPDLGKPSNPLVSFLERLQETALITLGKSKFDAKTYVDLPLKFSLSETEEAFDQLARSANGSVPAEEFKGFIERYFDGAGDDVVNYEPEDYVAEPEGFLPKVEHPELRAWALKVHSLWKNLSRRVSSGVKSHPHLRTLLPLPASFVIPGSRFREVYYWDSYWVIRGLLVSKMYKTATAIVTNLISLIEDYGFVLNGARAYYTNRSQPPLLSSMIYEIYNSTGDIELVKRSLPALQKEYEFWNSDMHRVTIVDAQGRTHTLNRYYAKWNKPRPESSINDKAFSSKFLNVSEKQHFYREVASTAESGWDFSTRWMRDPSDFTTLATTAVVPVDLNAFILGMELNIAFLAEVTGDDCTAQHFLQLADSRKKAFNSVFWNKSKKQWLDYWLTSSTCQEAQVWNAHQQNQNVFASNFVPLWMEPFYSDSSVVGSVAESLKTSGLLGAAGIATSLTNSGQQWDFPNGWAPLQHMIVEGLVKSGLKEAASLGQEIARRWIATNYITYKKSGLMHEKYNVEHCGEFGGGGEYSTQTGFGWSNGVVLAFLDEFGWPRHLDIDCSSIPSEIHSTRN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1251 581 ProSitePatterns Trehalase signature 2. 470 479 IPR018232 GO:0004555|GO:0005991
Prci10g1251 581 Pfam Trehalase 46 560 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 PRINTS Glycosyl hydrolase family 37 signature 342 359 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 PRINTS Glycosyl hydrolase family 37 signature 275 292 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 PRINTS Glycosyl hydrolase family 37 signature 463 479 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 PRINTS Glycosyl hydrolase family 37 signature 310 327 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 PRINTS Glycosyl hydrolase family 37 signature 385 401 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 PRINTS Glycosyl hydrolase family 37 signature 205 223 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 PRINTS Glycosyl hydrolase family 37 signature 543 556 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 SUPERFAMILY Six-hairpin glycosidases 39 562 IPR008928 GO:0005975
Prci10g1251 581 PANTHER TREHALASE 26 573 IPR001661 GO:0004555|GO:0005991
Prci10g1251 581 Gene3D - 33 568 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1251 Prci-Chr10 8240944 8245362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1251 15 569 Trehalose Biosynthesis Gene Families AT4G24040 58.584 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1251 K01194 - gmx:547539 877.085