Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1250 ATGTCCGCTTCTCGCATCGCAGAATCTTCATCTGCTTGTTCTTTGGACCCAGACCTCGGGAAACCCTCAAACCCTCTTGTCTCCTTCCTCGAACGTTTGCAGGAAACCGCTTTAATCACTTTGGGCAAATCTAAATTCGATGCAAAAACATATGTGGACTTGCCATTGAAGTTCAGCTTGTCTGAGACAGAGGAGGCATTTGATCAACTTGCTAGGTCTGCTAACGGCTCTGTACCTGCCGAGGAGTTCAAAGGTTTTATAGAAAGATACTTTGATGGTGCAGGGGACGATGTGGTGAACTACGAACCAGAGGATTACGTAGCAGAGCCCGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAGTTGAGGGCATGGGCATTGAAGGTTCATTCCCTTTGGAAAAACTTGAGTCGCAGAGTATCAAGTGGGGTCAAAAGTCATCCCCATTTGCGTACTCTGCTTCCTTTGCCAGCTTCTTTTGTCATTCCTGGTTCACGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGGTCATCAGGGGTTTACTGGTGAGTAAAATGTACAAGACAGCCACGGCAATCGTGACTAATCTTATTTCATTAATAGAGGATTATGGGTTTGTGCTTAATGGTGCAAGAGCCTACTACACTAACAGAAGAGGAAATAGCGACTACAAGCTTGATTATGATTTTTGCAGCCAACCTCCCCTTTTAAGTTCTATGATTTATGAGATTTACAACAGCACTGGTGATATAGAGTTGGTCAAAAGATCGCTTCCTGCACTACAGAAAGAATATGAATTTTGGAATTCAGACATGCATAGGGTGACCATTGTGGATGCTCAAGGTCGCACTCACACCTTAAATCGTTATTATGCAAAGTGGAATAAACCCAGGCCAGAGTCTTCAATAAACGACAAGGCATTTTCTTCCAAGTTTTTGAATGTTTCAGAAAAACAGCACTTTTACCGTGAAGTGGCTTCAACTGCTGAATCAGGATGGGATTTTAGCACAAGATGGATGAGAGATCCTTCAGATTTTACCACATTGGCGACAACAGCAGTAGTACCTGTTGATCTAAATGCTTTTATACTAGGGATGGAACTTAATATTGCATTTTTAGCTGAAGTTACTGGAGATGATTGCACTGCTCAGCACTTCCTGCAACTTGCTGATTCTAGAAAGAAGGCGTTCAACTCTGTTTTCTGGAACAAAAGTAAGAAACAATGGCTTGATTATTGGCTCACAAGTAGTACATGTCAGGAAGCTCAAGTATGGAATGCTCACCAGCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTATGGATGGAACCATTTTACTCAGACTCGTCGGTTGTGGGTAGCGTTGCCGAAAGCCTCAAAACCAGTGGGCTGCTTGGTGCTGCTGGAATTGCAACCTCTTTGACGAATTCAGGACAACAGTGGGACTTTCCAAATGGCTGGGCCCCACTTCAACATATGATAGTAGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCACTGGGGCAAGAAATTGCAAGGAGATGGATCGCAACCAATTATATCACCTACAAGAAATCGGGGCTCATGCATGAAAAATATAATGTGGAGCATTGTGGAGAGTTTGGAGGTGGGGGTGAATATTCAACCCAGACTGGTTTTGGGTGGTCGAACGGAGTGGTGCTTGCTTTCTTGGACGAGTTTGGATGGCCGCGACATCTCGATATTGACTGCTCATCGATTCCCTCTGAAATTCACAGCACTCGCAACTGA 1785 0.4398 MSASRIAESSSACSLDPDLGKPSNPLVSFLERLQETALITLGKSKFDAKTYVDLPLKFSLSETEEAFDQLARSANGSVPAEEFKGFIERYFDGAGDDVVNYEPEDYVAEPEGFLPKVEHPELRAWALKVHSLWKNLSRRVSSGVKSHPHLRTLLPLPASFVIPGSRFREVYYWDSYWVIRGLLVSKMYKTATAIVTNLISLIEDYGFVLNGARAYYTNRRGNSDYKLDYDFCSQPPLLSSMIYEIYNSTGDIELVKRSLPALQKEYEFWNSDMHRVTIVDAQGRTHTLNRYYAKWNKPRPESSINDKAFSSKFLNVSEKQHFYREVASTAESGWDFSTRWMRDPSDFTTLATTAVVPVDLNAFILGMELNIAFLAEVTGDDCTAQHFLQLADSRKKAFNSVFWNKSKKQWLDYWLTSSTCQEAQVWNAHQQNQNVFASNFVPLWMEPFYSDSSVVGSVAESLKTSGLLGAAGIATSLTNSGQQWDFPNGWAPLQHMIVEGLVKSGLKEAASLGQEIARRWIATNYITYKKSGLMHEKYNVEHCGEFGGGGEYSTQTGFGWSNGVVLAFLDEFGWPRHLDIDCSSIPSEIHSTRN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1250 594 Pfam Trehalase 46 573 IPR001661 GO:0004555|GO:0005991
Prci10g1250 594 Gene3D - 33 581 IPR012341 GO:0005975
Prci10g1250 594 SUPERFAMILY Six-hairpin glycosidases 39 575 IPR008928 GO:0005975
Prci10g1250 594 PANTHER TREHALASE 26 586 IPR001661 GO:0004555|GO:0005991
Prci10g1250 594 ProSitePatterns Trehalase signature 2. 483 492 IPR018232 GO:0004555|GO:0005991
Prci10g1250 594 PRINTS Glycosyl hydrolase family 37 signature 323 340 IPR001661 GO:0004555|GO:0005991
Prci10g1250 594 PRINTS Glycosyl hydrolase family 37 signature 355 372 IPR001661 GO:0004555|GO:0005991
Prci10g1250 594 PRINTS Glycosyl hydrolase family 37 signature 556 569 IPR001661 GO:0004555|GO:0005991
Prci10g1250 594 PRINTS Glycosyl hydrolase family 37 signature 476 492 IPR001661 GO:0004555|GO:0005991
Prci10g1250 594 PRINTS Glycosyl hydrolase family 37 signature 398 414 IPR001661 GO:0004555|GO:0005991
Prci10g1250 594 PRINTS Glycosyl hydrolase family 37 signature 205 223 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1250 Prci-Chr10 8240944 8245565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1250 15 582 Trehalose Biosynthesis Gene Families AT4G24040 57.266 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1250 K01194 - gmx:547539 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1250 10 8240944 8245565 Prci10g1250 10 8240944 8245565 ECH