Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1232 ATGGACGCTGAAATCAAAGGACGAATCGAGACAACTGTTCGGAGGATTTTGCAAGAATCAGACATGGACGAGCTCACTGAGTCCCAGATTAGGAAGCAAGCGGCCAAAGAGCTGGACCTGGACCTGTCGCAGCCGCATTACAAAACCTTTGTGAAGCAGATTGTGCAGTCCTTTATTCAGGAAAAACAAGAGGAGCAGGAGGACGAGGAGTACGACGATGAGGGCAATCTCATTATCTGCAAGCTTTCTGCCCAGAGAAGGGTGACGATTCAAGAATTCAGAGGGAAAACATTGATCTCTATCCGGGAGTATTATAGAAAGGACGGTAAAGAACTTCCTTCTTCGAAAGGAATAAGTTTGACGGAGGAGCAGTGGTCAGCGTTGAAGAAGAACATACCTGCCATAGAAAAAGCCATTGAGAAGATGGAGTCAAACATATAA 441 0.458 MDAEIKGRIETTVRRILQESDMDELTESQIRKQAAKELDLDLSQPHYKTFVKQIVQSFIQEKQEEQEDEEYDDEGNLIICKLSAQRRVTIQEFRGKTLISIREYYRKDGKELPSSKGISLTEEQWSALKKNIPAIEKAIEKMESNI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1232 146 Gene3D - 4 62 - -
Prci10g1232 146 Pfam Transcriptional Coactivator p15 (PC4) 80 131 IPR003173 GO:0003677|GO:0006355
Prci10g1232 146 FunFam RNA polymerase II transcriptional coactivator KELP 69 145 - -
Prci10g1232 146 SUPERFAMILY DEK C-terminal domain 8 60 - -
Prci10g1232 146 Gene3D Transcriptional Coactivator Pc4; Chain A 69 146 IPR009044 GO:0003677|GO:0006355
Prci10g1232 146 Pfam DEK C terminal domain 8 59 IPR014876 -
Prci10g1232 146 SUPERFAMILY ssDNA-binding transcriptional regulator domain 79 141 IPR009044 GO:0003677|GO:0006355
Prci10g1232 146 PIRSF RNA_polymII_KELP 1 146 IPR017415 -
Prci10g1232 146 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 145 IPR045125 GO:0003713|GO:0060261
Prci10g1232 146 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1232 Prci-Chr10 8104606 8107182 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Prci10g1232 DEK_C 2.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1232 K25815 - gmx:100305633 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1232 10 8104606 8107182 Prci10g1232 10 8104606 8107182 ECH