Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1194 ATGTGTAGAGGGAAGAGAAGAGAGAACGAAGAGCGAAGGCAGGGGAGAAATATGGAACTAAATATTGCTGGCAGGTCCTCTGTAGTAGTTATGGGGCTTGATGGAGCAACCATAGAGAAGTATCCGATGACCCGCATTGGTGATAGTGGAAGACTGCCCGACCCGAACAACAACGTGTGCTCTATATGTCTCAGTGACTACCAACCCGAGGACACGTTAAGGACTATCCCAGATTGCAATCACTACTTTCACGCCCAATGCATAGATGGATGGCTCCGCATGAATGCTACTTGTCCCTTGTGTCGAAAATTACCCCACTCTTAA 324 0.4784 MCRGKRRENEERRQGRNMELNIAGRSSVVVMGLDGATIEKYPMTRIGDSGRLPDPNNNVCSICLSDYQPEDTLRTIPDCNHYFHAQCIDGWLRMNATCPLCRKLPHS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1194 107 CDD RING-H2_EL5-like 60 102 - -
Prci10g1194 107 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 20 105 IPR046948 -
Prci10g1194 107 Pfam Ring finger domain 59 102 IPR001841 -
Prci10g1194 107 SUPERFAMILY RING/U-box 54 104 - -
Prci10g1194 107 ProSiteProfiles Zinc finger RING-type profile. 60 102 IPR001841 -
Prci10g1194 107 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 106 IPR013083 -
Prci10g1194 107 SMART ring_2 60 101 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1194 Prci-Chr10 7966845 7967168 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1194 17 105 C3H Transcription Factor Family AT5G07040 51.685 2.62e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1194 - - pcin:129322049 221.476