Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1175 ATGGAAGGATTTCAAGAGACAGATGTTCAGCTTGAACCGCACAAGATTGCTGATATCGGGTCATCTTTATCAAATCTGATATTATCCGGCGGGACAAACCCCTTGGATTCTATTTTCTCTCAGTGTCCCCAAACAAATTCCATCAGCAACCCCATGATTGAGGCCTTATGTTCATGCGGGTTTGAACCGCTGGGCTCGTCTGTGTACCTTCGTCAAAGAGACATTCTGCAGAAATTCTACGAGGATAACCGAGCGAGCAGTTCATTTAGTGGTCTATCATCGACGAATCAGCGCCTAAACTATGCAGGAGCAACACCATACTCGTACATGAACCCCTGCAAGAAAAAGCTATACAGGGGAGTGAGACAGAGACACTGGGGAAAATGGGTGGCCGAAATTAGACTTCCTCAGAACAGAATGCGAGTGTGGTTAGGCACTTATGAAACTGCCGAAGCTGCGGCTTATGCGTACGATCGTGCTGCTTATAAACTCCGAGGCGAATATGCTCGTTTGAATTTCCCGAATCTGAAGGACCCCAGTAAGCTAGGATTCGGAGATAGCTCCAGATTAAATGCTTTGAAGACCTCCGTGGATGCTAAAATTCAGGCCATCTGTCTAAAGGTGAAGAGGGAGAGAGCCAAGAAGAGCAGCGCTAAGAAGCCTAAATCTAATCCCAGCACCGACGAGACTCAGACATCGCAAAAGATCGAATCGCCCTCTTGTTCTTCATCCTCGGTACCGTTTTCCCCGCTAGTTTTCGACGACAGTTGGACGAACGAGTTAATTTCACCGACGATTTCAGAAGACGGAATATGGAAGGGCGAGAACTCGCCGTCCGCTATTTCAGCCGAGTGTCCGACAATGGTAACAGAGGAATCAGCATTCGAAGGTTGTTCCCTGGCAAGGATACCTTCCTTCGATCCGGAGTTAATCTGGGAAGTGCTTGCTAATTAA 954 0.4759 MEGFQETDVQLEPHKIADIGSSLSNLILSGGTNPLDSIFSQCPQTNSISNPMIEALCSCGFEPLGSSVYLRQRDILQKFYEDNRASSSFSGLSSTNQRLNYAGATPYSYMNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSSRLNALKTSVDAKIQAICLKVKRERAKKSSAKKPKSNPSTDETQTSQKIESPSCSSSSVPFSPLVFDDSWTNELISPTISEDGIWKGENSPSAISAECPTMVTEESAFEGCSLARIPSFDPELIWEVLAN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1175 317 MobiDBLite consensus disorder prediction 223 246 - -
Prci10g1175 317 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Prci10g1175 317 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Prci10g1175 317 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 45 315 - -
Prci10g1175 317 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
Prci10g1175 317 MobiDBLite consensus disorder prediction 212 246 - -
Prci10g1175 317 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Prci10g1175 317 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Prci10g1175 317 FunFam Ethylene-responsive transcription factor 2 116 175 - -
Prci10g1175 317 CDD AP2 116 176 IPR001471 GO:0003700|GO:0006355
Prci10g1175 317 Gene3D AP2/ERF domain 117 175 IPR036955 GO:0003700|GO:0006355
Prci10g1175 317 SUPERFAMILY DNA-binding domain 117 174 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1175 Prci-Chr10 7851950 7853624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1175 15 317 AP2-EREBP Transcription Factor Family AT1G64380 48.974 1.69e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci10g1175 AP2 4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1175 - - qsa:O6P43_024033 371.318