Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1170 ATGGATGATCATCACCCAAAACAGTCAAACTCAGAAGAAGTGAGCAGTATTGAGTGGGAGTTCATAAAGATGAGTGAGCAAGAGGAGGATCTCATCTACAGGATGTACAGGCTCGTCGGCGACAGGTGGGATTTGATAGCGGGACGCGTTCCTGGTCGTAAAGCAGAAGAGATAGAAAGATTCTGGATAATGAAACACAGTGAAGCCTTCTCTGCTACAAGCAGAACAATTCAACATGTGTCTAAAACCCCCAGTGACGACTCATGA 267 0.4569 MDDHHPKQSNSEEVSSIEWEFIKMSEQEEDLIYRMYRLVGDRWDLIAGRVPGRKAEEIERFWIMKHSEAFSATSRTIQHVSKTPSDDS 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1170 88 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 71 - -
Prci10g1170 88 Gene3D - 24 87 - -
Prci10g1170 88 Pfam Myb-like DNA-binding domain 24 63 IPR001005 -
Prci10g1170 88 FunFam MYB-like transcription factor 23 65 - -
Prci10g1170 88 SUPERFAMILY Homeodomain-like 25 63 IPR009057 -
Prci10g1170 88 CDD SANT 23 62 IPR001005 -
Prci10g1170 88 SMART sant 20 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1170 Prci-Chr10 7806887 7809568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1170 24 62 MYB Transcription Factor Family AT5G52600 58.974 1.05e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci10g1170 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1170 K09422 - pop:7489814 121.324