Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1169 ATGGACGCAGAAGTGAGCAGTATTGAGTGGGAGTTCATAAAGATGAGTGAGCAAGAGGAGGATCTCATCTACAGGATGTACAGGCTCGTCGGCGACAGGTGGGATTTGATAGCGGGACGCGTTCCTGGTCGTAAAGCAGAAGAGATAGAAAGATTCTGGATAATGAAACACAGTGAAGCCTTCTCTGCTACAAGCAGAACAATTCAACATGTGTCTAAAACCCCCAGTGACGACTCATGA 240 0.4708 MDAEVSSIEWEFIKMSEQEEDLIYRMYRLVGDRWDLIAGRVPGRKAEEIERFWIMKHSEAFSATSRTIQHVSKTPSDDS 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1169 79 FunFam MYB-like transcription factor 14 56 - -
Prci10g1169 79 CDD SANT 14 53 IPR001005 -
Prci10g1169 79 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 14 62 - -
Prci10g1169 79 SMART sant 11 59 IPR001005 -
Prci10g1169 79 Pfam Myb-like DNA-binding domain 15 54 IPR001005 -
Prci10g1169 79 SUPERFAMILY Homeodomain-like 16 54 IPR009057 -
Prci10g1169 79 Gene3D - 15 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1169 Prci-Chr10 7806887 7809574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1169 15 53 MYB Transcription Factor Family AT5G52600 58.974 5.78e-13 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci10g1169 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1169 K09422 - pop:7489814 116.316