Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1168 ATGGAGGATAAAATGAGGTGGGAGCCAAGCATACTCATGAATGAGCTGCTTCAAGGAATGGAGGCAGCGAGGAAGTTGAGCGCAGATTTTAGGACAGAATCTTCAGTAGAGACCAGGGATTTGCTGGTACAGAGGATATTATCATCTTATGAAAAGGCTCTACTAATTCTGAAATGGAATGCATCAAATACCGATCCTCTTCCCATAGAGGGAGTTTCTGGTTTGCCGCCGGAGTCTCCAATGTGTGCCAACGTAAGCCCTTTGAGAGATGACATTGACGGAGACATCAAAGATCACCCTGAATTTAAATTAGACTCCAAGAAAAGAAAGATGATGCCCACATGGATGGAACAAGTAAGATCTAGCTCAGAGACTGCCCTTGAAGGACCCCATGATGATGGCTTCAGCTGGAGAAAATATGGACAGAAAGACATCCTAGGTGCCAAATATCCTAGGAGTTACTATAGGTGCACTTTCCGCAAGACTCAGAACTGCTGGGCCACGAAGCAAATACAAAGATCAGATGAAGACCCTACTGTATTTGACATCACTTACCGAGGAAGGCATACTTGTTCCCTGGGAAATAATTCTGTTCAACCACCTAAGTCCCCAGACAAACAGGAGAAACTAAATAATTATGAAAGTGATATCCGCCATCACGAGCCATTACAAGAGAGCCTAGTGAAATTTAGAAATAACTTGAGTGTCAGTACAGGTAACCTTCAACACGACGAGATGGCAAATCCGTTTACTTTCCTTTCAACTTCCTCTGGATACATCACACCAGAAAGCCACAATTTACCTCCCTTGGCACTAGAGAATGATTCCTTCTGGGGGAACCTTTCACAAACAGACATGCTGTCCCCAAACACGCCACAATCATACTATTTACCATCTCTGTCTTTCAAGATGGATGAGTTCCATGGCATCAAACACCAGCCATGCTCGGAATCTGACATTACTGAGATCATTTCAGCCAACACATCAGCCAGCAATTCTCCAATTCTTGATTTTAATTTCCCTATTGATCCAGCGGAAATTGATCCAAATTTCCCCTTTGACACGCCTGGGCTTTTCCCATAA 1083 0.4367 MEDKMRWEPSILMNELLQGMEAARKLSADFRTESSVETRDLLVQRILSSYEKALLILKWNASNTDPLPIEGVSGLPPESPMCANVSPLRDDIDGDIKDHPEFKLDSKKRKMMPTWMEQVRSSSETALEGPHDDGFSWRKYGQKDILGAKYPRSYYRCTFRKTQNCWATKQIQRSDEDPTVFDITYRGRHTCSLGNNSVQPPKSPDKQEKLNNYESDIRHHEPLQESLVKFRNNLSVSTGNLQHDEMANPFTFLSTSSGYITPESHNLPPLALENDSFWGNLSQTDMLSPNTPQSYYLPSLSFKMDEFHGIKHQPCSESDITEIISANTSASNSPILDFNFPIDPAEIDPNFPFDTPGLFP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1168 360 Gene3D WRKY domain 116 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g1168 360 FunFam WRKY transcription factor 53 117 194 - -
Prci10g1168 360 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g1168 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 270 IPR044810 GO:0003700
Prci10g1168 360 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g1168 360 ProSiteProfiles WRKY domain profile. 126 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g1168 360 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1168 Prci-Chr10 7803284 7805210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1168 3 352 WRKY Transcription Factor Family AT4G11070 37.892 3.89e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci10g1168 WRKY 4.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1168 - - gmx:100815760 466.463