Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1154 ATGGCATTTCTGCGCATTTTCTATTCCATTTGCCTGCTGGATCTGATTCTCCGGCAAGGAAATGCAGAGCCTATTGAAGATAAGCGAGCTTTGCTTGATTTTGTGAACCAGTTCTCTCACTCTCGCCCTCTAAATTGGAATGAGAACTCTTCTGTATGTACTAACTGGACTGGAGTCACTTGTAACGAAGATAAGTCCCGAGTAATTGCTGTCCGACTTCCGGGAATTGGATTTCATGGAGCAATTCCACCCAATACAATTGGCCGCCTCTCAGCACTGCAAATCGTGAGCCTCAGATCCAATTTTATCAGTGGGAGTTTTCCTTCTGATTTGTCTGAGTTAAAAAATCTATCTGTGCTTTATCTTCAATTTAACAACCTGTCGGGTTCTTTACCGGATTTCTCAGTCTGGAAGAATCTTACCATCGTCAATTTGTCCAATAATCGTTTCAATGGCAGCATTCCTTTCTCAATTTCTAATTTGACTGAACTTGCTGGTTTGAATCTCGCAAACAACTCGCTTTCTGGTGAAATTCCTGATATCCAGTTGCTCAGATTGCAACAGTTGAATTTATCTAACAACAAGTTGAACGGTAGTGTACCTAATTCTCTCCAGAGGTTTCCTATGTCAGCATTCCTAGGTAATAACATATCTTTTGGAAATTATCCCCACCTTTCTCCTGTACTTCCTCCTTCTTTCAAACCGTCTTCAAAATCTAAGAAACACGGAGGTCTCCGGGAAACAACACTACTAGGAGTTTCGACTGCCGTTGGTGTTCTTGCCCTTTTCGCTTTTGGTTTTCTGATGTTTGTATGCTTCTCGAGAAGGAGGGACGAAGATGGGTTCTCTGGGAAGTTGCAAAAGGGAGGAATGTCTCCGGAGAAAGAAGTTTCGAGGAATCAAGATGCGAATAATAAACTAGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTGTTACGGGCTTCTGCTGAGGTACTGGGCAAGGGAACGTTTGGCACTGCATACAAGGCCATACTAGAGGATGCTTCCACAGTGGTCGTCAAGAGGCTGAAGGATGTAGCTGTTGGAAAAAAAGACTTTGAGCAACACATGGAGATTGTGGGAAGTCTTAAACATGATAATGTGGTTGAACTGAAAGCATATTACTATTCCAAGGATGAGAAATTGATGGTATATGATTATTACAGTCAGGGGAGCCTCTCTTCTTTACTGCATGGTAAAAGAGGAGAGGATAGGGTGGCCTTGGATTGGGATAGTCGGCTTAAAATAGCATTAGGTGCCGCAAGAGGGATTGCTCGTATCCACGCAGAGAATGGTGGAAAGATGGTGCATGGAAACATTAAATCTTCAAATATCTTTGTCAACTCTAAGCAGTATGGTTGTGTATCTGATCTTGGGTTGGCCATGATAATGAGCTCACTGGCCCTCCCGATCTCGCGTGCTTCTGGCTATCGAGCACCCGAAGTTACAGACACCAGAAAAGCAGCACAGCCTTCAGATATCTACAGTTTTGGAGTGGTTTTGCTGGAGCTTCTGACTGGGAAATCCCCCATTCTTACTACAGGTGGGGATGAGATTGTCCACTTGGTGAGGTGGGTTCATTCAGTTGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGACCTGGAACTGATGAGATACCCAAATATAGAAGAAGACATGGTGGAGATGTTACAGATAGCCATGGCTTGCGTGGCAAGGATGCCAGATCAGAGACCGAAGATTTCAGACGTTGTAAAGATGATAGAAAATGTGAGACAACTTGATGCCGATAATCGTCCACCACCTGAGAGCCAAGCTGAAAATGCATCACCACCGTCAGTGTTAGGTACTCATCTCTAA 1872 0.4386 MAFLRIFYSICLLDLILRQGNAEPIEDKRALLDFVNQFSHSRPLNWNENSSVCTNWTGVTCNEDKSRVIAVRLPGIGFHGAIPPNTIGRLSALQIVSLRSNFISGSFPSDLSELKNLSVLYLQFNNLSGSLPDFSVWKNLTIVNLSNNRFNGSIPFSISNLTELAGLNLANNSLSGEIPDIQLLRLQQLNLSNNKLNGSVPNSLQRFPMSAFLGNNISFGNYPHLSPVLPPSFKPSSKSKKHGGLRETTLLGVSTAVGVLALFAFGFLMFVCFSRRRDEDGFSGKLQKGGMSPEKEVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKKDFEQHMEIVGSLKHDNVVELKAYYYSKDEKLMVYDYYSQGSLSSLLHGKRGEDRVALDWDSRLKIALGAARGIARIHAENGGKMVHGNIKSSNIFVNSKQYGCVSDLGLAMIMSSLALPISRASGYRAPEVTDTRKAAQPSDIYSFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEDMVEMLQIAMACVARMPDQRPKISDVVKMIENVRQLDADNRPPPESQAENASPPSVLGTHL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1154 623 FunFam pollen receptor-like kinase 1 293 398 - -
Prci10g1154 623 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Prci10g1154 623 SUPERFAMILY Protein kinase-like (PK-like) 328 592 IPR011009 -
Prci10g1154 623 SUPERFAMILY L domain-like 39 207 - -
Prci10g1154 623 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 605 - -
Prci10g1154 623 Gene3D Transferase(Phosphotransferase) domain 1 399 611 - -
Prci10g1154 623 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1154 623 MobiDBLite consensus disorder prediction 599 623 - -
Prci10g1154 623 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Prci10g1154 623 Gene3D Ribonuclease Inhibitor 136 226 IPR032675 -
Prci10g1154 623 Pfam Protein kinase domain 327 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1154 623 Gene3D Phosphorylase Kinase; domain 1 291 398 - -
Prci10g1154 623 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Prci10g1154 623 PANTHER OS05G0588300 PROTEIN 9 604 - -
Prci10g1154 623 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1154 Prci-Chr10 7697675 7701700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1154 16 614 Receptor kinase-like Gene Family AT4G23740 65.742 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci10g1154 Pkinase 7.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1154 - - gmx:100804799 931.013