Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1117 ATGTCCAGTTTCAATGGAGATGTTCATGGTCAGTTTTCAGATCTTTTAAGGTTGTTTGAGTATGGAGGATACCCACCAGAAGCCAATTATTTGTTTCTTGGTGATTATGTTGATCGTGGGAAGCAGAGCATAGAGACAATATGTTTACTCCTTGCATACAAGATCAAATACAAGGAGAACTTCTTTCTTCTCAGGGGAAACCACGAATGTGCTTCCATAAATCGTATATATGGATTTTATGATGAATGCAAGAGAAGGTTTAATGTTCGCCTCTGGAAGACATTTACCGACTGCTTTAATTGTTTGCCTGTTGCTGCTCTTATAGATGAGAAGATCCTTTGCATGCATGGTGGACTATCTCCTGATCTTAAAAATTTGGATCAGATAAGAAATATTGGCCGCCCTGTTGATGTTCCTGATCAGGGCCTTCTCTGTGACCTGCTCTGGGCTGATCCTGATAAAGATCTTGATGGCTGGGGAGAAAATGACCGGGGTGTCTCATTTACATTTGGAGCTGACAAGGTTGTTGAATTTCTTGAAAAACATGATCTTGATCTGATTTGCAGAGCTCACCAGGTTGTTGAAGATGGATATGAGTTTTTTGCAAAGCGTCAGCTAGTGACCATATTCTCTGCCCCAAATTACTGTGGTGAGTTTGACAATGCTGGTGCCATGATGAGTGTAGATGACACCTTGACATGCTCTTTCCAGATCCTTAAAGCTTCTGACAAGAAAGGAAAAGGTGGATTTGGAAACAGCACGCAAAGACCAGGAACTCCACCCCACAAGGGTGGGAAGGGTTGA 804 0.4216 MSSFNGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKNLDQIRNIGRPVDVPDQGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEKHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASDKKGKGGFGNSTQRPGTPPHKGGKG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1117 267 SUPERFAMILY Metallo-dependent phosphatases 6 243 IPR029052 -
Prci10g1117 267 Gene3D - 3 251 IPR029052 -
Prci10g1117 267 ProSitePatterns Serine/threonine specific protein phosphatases signature. 64 69 IPR006186 GO:0016787
Prci10g1117 267 PRINTS Serine/threonine phosphatase family signature 126 153 IPR006186 GO:0016787
Prci10g1117 267 PRINTS Serine/threonine phosphatase family signature 97 123 IPR006186 GO:0016787
Prci10g1117 267 PRINTS Serine/threonine phosphatase family signature 1 28 IPR006186 GO:0016787
Prci10g1117 267 PRINTS Serine/threonine phosphatase family signature 30 57 IPR006186 GO:0016787
Prci10g1117 267 PRINTS Serine/threonine phosphatase family signature 63 87 IPR006186 GO:0016787
Prci10g1117 267 PRINTS Serine/threonine phosphatase family signature 183 203 IPR006186 GO:0016787
Prci10g1117 267 PRINTS Serine/threonine phosphatase family signature 205 221 IPR006186 GO:0016787
Prci10g1117 267 SMART pp2a_7 1 243 IPR006186 GO:0016787
Prci10g1117 267 MobiDBLite consensus disorder prediction 244 267 - -
Prci10g1117 267 FunFam Serine/threonine-protein phosphatase 2 252 - -
Prci10g1117 267 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 6 245 - -
Prci10g1117 267 Pfam Calcineurin-like phosphoesterase 6 193 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1117 Prci-Chr10 7408075 7413861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1117 6 186 Calmodulin-binding Proteins AT5G63870 31.481 4.47e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1117 K06269 - cit:102611078 536.569