Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1116 ATGTATATAGAATTTCTGGGTTTCCTTTCCTTTTTGATGGACGAGAACTTGCTCGACGATATTATCCGAAGGCTTATCGCGGCTAAGAACGGCAGAACGACGAAGCAGGTCCAGCTTACAGAGTCCGAAATCCGCCAGCTTTGTGTCTCCTCCAAGGAGGTCTTTCTCAGCCAGCCCAATCTTCTCGAACTTGAAGCACCGATAAAGATTTGTGGAGATGTTCATGGTCAGTTTTCAGATCTTTTAAGGTTGTTTGAGTATGGAGGATACCCACCAGAAGCCAATTATTTGTTTCTTGGTGATTATGTTGATCGTGGGAAGCAGAGCATAGAGACAATATGTTTACTCCTTGCATACAAGATCAAATACAAGGAGAACTTCTTTCTTCTCAGGGGAAACCACGAATGTGCTTCCATAAATCGTATATATGGATTTTATGATGAATGCAAGAGAAGGTTTAATGTTCGCCTCTGGAAGACATTTACCGACTGCTTTAATTGTTTGCCTGTTGCTGCTCTTATAGATGAGAAGATCCTTTGCATGCATGGTGGACTATCTCCTGATCTTAAAAATTTGGATCAGATAAGAAATATTGGCCGCCCTGTTGATGTTCCTGATCAGGGCCTTCTCTGTGACCTGCTCTGGGCTGATCCTGATAAAGATCTTGATGGCTGGGGAGAAAATGACCGGGGTGTCTCATTTACATTTGGAGCTGACAAGGTTGTTGAATTTCTTGAAAAACATGATCTTGATCTGATTTGCAGAGCTCACCAGGTTGTTGAAGATGGATATGAGTTTTTTGCAAAGCGTCAGCTAGTGACCATATTCTCTGCCCCAAATTACTGTGGTGAGTTTGACAATGCTGGTGCCATGATGAGTGTAGATGACACCTTGACATGCTCTTTCCAGATCCTTAAAGCTTCTGACAAGAAAGGAAAAGGTGGATTTGGAAACAGCACGCAAAGACCAGGAACTCCACCCCACAAGGGTGGGAAGGGTTGA 1002 0.4331 MYIEFLGFLSFLMDENLLDDIIRRLIAAKNGRTTKQVQLTESEIRQLCVSSKEVFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKNLDQIRNIGRPVDVPDQGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEKHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASDKKGKGGFGNSTQRPGTPPHKGGKG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1116 333 SUPERFAMILY Metallo-dependent phosphatases 6 309 IPR029052 -
Prci10g1116 333 MobiDBLite consensus disorder prediction 310 333 - -
Prci10g1116 333 PRINTS Serine/threonine phosphatase family signature 249 269 IPR006186 GO:0016787
Prci10g1116 333 PRINTS Serine/threonine phosphatase family signature 192 219 IPR006186 GO:0016787
Prci10g1116 333 PRINTS Serine/threonine phosphatase family signature 163 189 IPR006186 GO:0016787
Prci10g1116 333 PRINTS Serine/threonine phosphatase family signature 271 287 IPR006186 GO:0016787
Prci10g1116 333 PRINTS Serine/threonine phosphatase family signature 96 123 IPR006186 GO:0016787
Prci10g1116 333 PRINTS Serine/threonine phosphatase family signature 129 153 IPR006186 GO:0016787
Prci10g1116 333 PRINTS Serine/threonine phosphatase family signature 67 94 IPR006186 GO:0016787
Prci10g1116 333 FunFam Serine/threonine-protein phosphatase 11 315 - -
Prci10g1116 333 Pfam Calcineurin-like phosphoesterase 67 259 IPR004843 GO:0016787
Prci10g1116 333 Pfam Serine-threonine protein phosphatase N-terminal domain 18 65 IPR031675 -
Prci10g1116 333 ProSitePatterns Serine/threonine specific protein phosphatases signature. 130 135 IPR006186 GO:0016787
Prci10g1116 333 Gene3D - 10 317 IPR029052 -
Prci10g1116 333 CDD MPP_PP1_PPKL 18 306 - -
Prci10g1116 333 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 23 311 - -
Prci10g1116 333 SMART pp2a_7 39 309 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1116 Prci-Chr10 7408075 7414304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1116 68 255 Calmodulin-binding Proteins AT5G63870 30.493 1.90e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1116 K06269 - gmx:100783178 640.958