Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1115 ATGTGTGTGTCTATATATATGTATATAGAATTTCTGGGTTTCCTTTCCTTTTTGATGGACGAGAACTTGCTCGACGATATTATCCGAAGGCTTATCGCGGCTAAGAACGGCAGAACGACGAAGCAGGTCCAGCTTACAGAGTCCGAAATCCGCCAGCTTTGTGTCTCCTCCAAGGAGGTCTTTCTCAGCCAGCCCAATCTTCTCGAACTTGAAGCACCGATAAAGATTTGTGGAGATGTTCATGGTCAGTTTTCAGATCTTTTAAGGTTGTTTGAGTATGGAGGATACCCACCAGAAGCCAATTATTTGTTTCTTGGTGATTATGTTGATCGTGGGAAGCAGAGCATAGAGACAATATGTTTACTCCTTGCATACAAGATCAAATACAAGGAGAACTTCTTTCTTCTCAGGGGAAACCACGAATGTGCTTCCATAAATCATGAGAAGATCCTTTGCATGCATGGTGGACTATCTCCTGATCTTAAAAATTTGGATCAGATAAGAAATATTGGCCGCCCTGTTGATGTTCCTGATCAGGGCCTTCTCTGTGACCTGCTCTGGGCTGATCCTGATAAAGATCTTGATGGCTGGGGAGAAAATGACCGGGGTGTCTCATTTACATTTGGAGCTGACAAGGTTGTTGAATTTCTTGAAAAACATGATCTTGATCTGATTTGCAGAGCTCACCAGGTTGTTGAAGATGGATATGAGTTTTTTGCAAAGCGTCAGCTAGTGACCATATTCTCTGCCCCAAATTACTGTGGTGAGTTTGACAATGCTGGTGCCATGATGAGTGTAGATGACACCTTGACATGCTCTTTCCAGATCCTTAAAGCTTCTGACAAGAAAGGAAAAGGTGGATTTGGAAACAGCACGCAAAGACCAGGAACTCCACCCCACAAGGGTGGGAAGGGTTGA 918 0.4368 MCVSIYMYIEFLGFLSFLMDENLLDDIIRRLIAAKNGRTTKQVQLTESEIRQLCVSSKEVFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINHEKILCMHGGLSPDLKNLDQIRNIGRPVDVPDQGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEKHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASDKKGKGGFGNSTQRPGTPPHKGGKG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1115 305 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 145 283 - -
Prci10g1115 305 Pfam Calcineurin-like phosphoesterase 73 231 IPR004843 GO:0016787
Prci10g1115 305 Gene3D - 16 146 IPR029052 -
Prci10g1115 305 Gene3D - 147 289 IPR029052 -
Prci10g1115 305 ProSitePatterns Serine/threonine specific protein phosphatases signature. 136 141 IPR006186 GO:0016787
Prci10g1115 305 SMART pp2a_7 45 281 IPR006186 GO:0016787
Prci10g1115 305 Pfam Serine-threonine protein phosphatase N-terminal domain 24 71 IPR031675 -
Prci10g1115 305 PRINTS Serine/threonine phosphatase family signature 73 100 IPR006186 GO:0016787
Prci10g1115 305 PRINTS Serine/threonine phosphatase family signature 102 129 IPR006186 GO:0016787
Prci10g1115 305 PRINTS Serine/threonine phosphatase family signature 135 159 IPR006186 GO:0016787
Prci10g1115 305 PRINTS Serine/threonine phosphatase family signature 221 241 IPR006186 GO:0016787
Prci10g1115 305 PRINTS Serine/threonine phosphatase family signature 243 259 IPR006186 GO:0016787
Prci10g1115 305 FunFam Protein CBR-PPH-1 123 287 - -
Prci10g1115 305 MobiDBLite consensus disorder prediction 282 305 - -
Prci10g1115 305 SUPERFAMILY Metallo-dependent phosphatases 7 281 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1115 Prci-Chr10 7408075 7414390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1115 74 224 Calmodulin-binding Proteins AT5G63870 27.727 8.22e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1115 K06269 - gmx:100783178 546.584