Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1107 ATGGCAAGCGAACTTGAAAAGAAGGCCAATGAAGCGTTCTTCGAGGATGACTTCCCTCTCGCTGTTCATTTGTACTCTCAAGCAATCGACTTGGATCCCTCCAACGCCGATTTCTTTGCCGACAGAGCTCAGGCCCACATTAAACTCAACAACTTCACTGAAGCGGTTTCGGATGCAAACAAAGCAATCGAATTGAACTCATGGTTGACAAAAGCGTATCTTCGTAAAGGGACTGCATGTTTAAAGCTTAAAGAGTATCATACTGCCAAGGTGGCGCTTGAGACTGGTGCTTCACTGTGTCAAAATGATTCAAGATTCACCAAGTTGATCGACGAATGTAATCGCCATGTCACAAAGGAATCCAATGGTCTCACTAACTCTTTATCAACAAATGGGGCAGCATTGACTGTATTGCCTACTAGAACTGAAGAAGATGAAAGATTTAGTCATGCGAGTCAAACACACACTGATACCTCTGCGAAACCAAGATACAGACACGAATACTTCCAAAAACCAGAGGAAGTGGTTTTGACAATTTTTGCAAAAGGAATACCCGCAAAAAATGTGGTGGTTCAGTTTGGTGAACAAATTCTGAGCATTACTATTGATGTTCCTGGCCAAGAAGCCTATCGCTATCAATCTCGATTATTCGGAAAGATAATACCTGATAAGTGCAGATTTGAGGTGTTGTCAACCAAAGTTGAAATCCGTCTAGCAAAAGCTGAAGATATTAATTGGACATCTTTTGAATATGCCAAGGATGCACTTCCTCAGACAAAAAATATTCCATCAACTGGATCTCATAGGCCTACATACCCATCATCAAAGGCAAAGAAAGACTGGGATAAGCTGGAAGCTCAAGTAAAGAAAGAGGAGAAGGAAGAAAAGCTAGATGGTGATGCTGGTCTGAACAAGCTGTTCAGAGATATATTCCAAAATGCAGATGAGGACATGAGGAGAGCGATGACTAAGTCATTTGTGGAGTCCAATGGGACAGTGCTGTCAACAGACTGGAAAGAAGTGGGATCCAAGAAGGTTGAGGGCAGTCCTCCGGAAGGCATGGAGATGAAGAAATGGGAATACTGA 1086 0.4254 MASELEKKANEAFFEDDFPLAVHLYSQAIDLDPSNADFFADRAQAHIKLNNFTEAVSDANKAIELNSWLTKAYLRKGTACLKLKEYHTAKVALETGASLCQNDSRFTKLIDECNRHVTKESNGLTNSLSTNGAALTVLPTRTEEDERFSHASQTHTDTSAKPRYRHEYFQKPEEVVLTIFAKGIPAKNVVVQFGEQILSITIDVPGQEAYRYQSRLFGKIIPDKCRFEVLSTKVEIRLAKAEDINWTSFEYAKDALPQTKNIPSTGSHRPTYPSSKAKKDWDKLEAQVKKEEKEEKLDGDAGLNKLFRDIFQNADEDMRRAMTKSFVESNGTVLSTDWKEVGSKKVEGSPPEGMEMKKWEY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1107 361 Coils Coil 274 294 - -
Prci10g1107 361 Gene3D - 162 253 IPR008978 -
Prci10g1107 361 SUPERFAMILY HSP20-like chaperones 148 258 IPR008978 -
Prci10g1107 361 MobiDBLite consensus disorder prediction 341 361 - -
Prci10g1107 361 CDD p23_CS_SGT1_like 167 250 - -
Prci10g1107 361 FunFam Protein SGT1 homolog 1 127 - -
Prci10g1107 361 SMART tpr_5 70 103 IPR019734 GO:0005515
Prci10g1107 361 SMART tpr_5 2 35 IPR019734 GO:0005515
Prci10g1107 361 SMART tpr_5 36 69 IPR019734 GO:0005515
Prci10g1107 361 FunFam Protein SGT1 homolog A 159 263 - -
Prci10g1107 361 PANTHER PROTEIN SGT1 HOMOLOG 1 359 IPR044563 GO:0051087
Prci10g1107 361 Pfam CS domain 165 240 IPR007052 -
Prci10g1107 361 Gene3D Tetratricopeptide repeat domain 1 128 IPR011990 GO:0005515
Prci10g1107 361 ProSiteProfiles CS domain profile. 161 250 IPR007052 -
Prci10g1107 361 SUPERFAMILY TPR-like 2 113 IPR011990 GO:0005515
Prci10g1107 361 Pfam Tetratricopeptide repeat 71 102 IPR019734 GO:0005515
Prci10g1107 361 Pfam Tetratricopeptide repeat 39 66 IPR019734 GO:0005515
Prci10g1107 361 ProSiteProfiles SGS domain profile. 271 361 IPR007699 -
Prci10g1107 361 MobiDBLite consensus disorder prediction 259 280 - -
Prci10g1107 361 Pfam SGS domain 279 359 IPR007699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1107 Prci-Chr10 7386785 7390380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1107 1 106 U-box Gene Family AT3G07370 30.556 1.49e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1107 K12795 - rcu:8287441 498.819