Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1102 ATGGATGAACTTGCTCGCTTGATGGACTGGGATTTGCAAGCTATTGTGAGAGGATTCACCGGTGAAGCCCCGGAAACAACCACGATCATAGACATCGCACAACCTAATTTTCCTCATTTCTGTTCTGAATTACAAGGTTGTCACGATGATCCTTTCTGCAGTACTTTTCCAGAATTCTCAGACACCACGATGGTGTTTGATGAATTGGGAGAGTTTTACAAGCCTTTCTATCCTGTTTTACACCCTCTTTCAACAAAAGCAATCGCCACGACCTCCGTATCCATCCCTAAAGAAATCAAAGAATCAGAGAAAGTACAAGATTTGCAAGATCCAGCAGTATCTCAGTGTAAAAGAAGCAAGAAGAACCAGAACAAGAGAGTGGTGAAGCAGGTGAAAGCAGATGGACTATGCGATTCATGGGCATGGCGTAAATACGGGCAGAAACCAATCAAAGGATCGCCATATCCCAGAAGTTACTACAGATGCAGCAGTTCCAAAGGATGCATGGCGAGGAAACAAGTGGAAAGGAGCCATTTGGATCCTGAAGTTTTCATAGTGACCTATACTGCACAACACAGTGATCATCACCCACCTCGTTCCTCTCGCAAAACCAGGCACTCTATTCCACATGGAACTAATCATCAACACGTTTCTTCTGATCCTTTGGAAGACTCTGTTGAGGATGAACCAATCGTGTCCAGTGGGTCAAGCCAGTGCTTGAACAAAGACCAATTGACGTCCCAAGATGCTGAAACTGGGGAGATTTTTACGGGTCATGGTATCCCACCAGCCAGTAATGATTGGTTTCCGAGCGTAGATGAACTTGACGGACTCAGCCAAGAATTTGCATTAGATAGTTACCTTCATGGCCAATTCTGA 879 0.4471 MDELARLMDWDLQAIVRGFTGEAPETTTIIDIAQPNFPHFCSELQGCHDDPFCSTFPEFSDTTMVFDELGEFYKPFYPVLHPLSTKAIATTSVSIPKEIKESEKVQDLQDPAVSQCKRSKKNQNKRVVKQVKADGLCDSWAWRKYGQKPIKGSPYPRSYYRCSSSKGCMARKQVERSHLDPEVFIVTYTAQHSDHHPPRSSRKTRHSIPHGTNHQHVSSDPLEDSVEDEPIVSSGSSQCLNKDQLTSQDAETGEIFTGHGIPPASNDWFPSVDELDGLSQEFALDSYLHGQF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1102 292 MobiDBLite consensus disorder prediction 230 245 - -
Prci10g1102 292 SMART WRKY_cls 136 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g1102 292 MobiDBLite consensus disorder prediction 189 245 - -
Prci10g1102 292 SUPERFAMILY WRKY DNA-binding domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g1102 292 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 89 230 IPR044810 GO:0003700
Prci10g1102 292 Gene3D WRKY domain 120 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g1102 292 ProSiteProfiles WRKY domain profile. 131 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g1102 292 FunFam WRKY transcription factor 22 120 190 - -
Prci10g1102 292 Pfam WRKY DNA -binding domain 138 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1102 Prci-Chr10 7347827 7349137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1102 1 240 WRKY Transcription Factor Family AT4G23550 42.146 5.78e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci10g1102 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1102 K13426 - gmx:102663255 234.572