Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1082 ATGGGATTCCCGGTGGGTTACACGGACCTTATCTTCCCCAAGATATTCCTCCATGTCCTCTCTCTCCTGGGTTTCATCAGAAAGCTCATCACCATTCTGTTTCGCTGCCTGGGTCTCCACGATTTTCTCGAACCCGACATTGCTTGGCCCCACCCGGTACCCGAATTCCACTCCGTGTCGGCCATGCTGATCCTGGAAATCCTGCCGGTGGGCAAGTTCTCGGACCTGGTGGACCCGCCGGACAGCTGCGCCGTGTGTCTTTACGAGTTTGAGGCGGACGACGAGATCAGGCGGCTCACCAATTGCAGGCACGTATATCACCGGGGATGTCTGGACCGTTGGATGGGGTACGATCAGAGAACGTGTCCCTTGTGCAGAACACCTTTCATACCTCACGATATGCAAGCCGCCTTCAATGATAGGCTCTGGGCTGCTTCTGGCATTCCTGAATTCTACGCTGATTCTGAAGATTACCCCCATCTTTCTGCTTTTTAG 495 0.5434 MGFPVGYTDLIFPKIFLHVLSLLGFIRKLITILFRCLGLHDFLEPDIAWPHPVPEFHSVSAMLILEILPVGKFSDLVDPPDSCAVCLYEFEADDEIRRLTNCRHVYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQAAFNDRLWAASGIPEFYADSEDYPHLSAF 164
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1082 164 Pfam Ring finger domain 81 126 IPR001841 -
Prci10g1082 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 29 145 - -
Prci10g1082 164 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Prci10g1082 164 SUPERFAMILY RING/U-box 72 132 - -
Prci10g1082 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 129 IPR013083 -
Prci10g1082 164 SMART ring_2 83 125 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci10g1082 Prci-Chr10 7196660 7197449 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1082 1 147 C3H Transcription Factor Family AT1G63840 59.740 4.37e-62 187
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1082 K16281 - jre:109014495 268.855