Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1079 ATGAATTCTGCTTCAACGTCTACAAATGCTTACGCTTTTGATTCATCTTTTCTCAGACATTCCAGCTCAGACATGGCCTCCTCGAATGGATGCGGAGACCTTTTCTTCTCCGACCCTTTTCCTTTCCCTCTCTTCACCCCCACTGACGTCGTTCCCCAGATTCCAAACAGCCAAACACAACACCCCATACTGGACGAAACTGCTTCTTCTCTTGACCCTTTTTCCTCTTCTTTCTTTTCCTTTTCTCCTCCAAGTACCCACCTGGAAAATCTGAGCCTTTACCAGCCTCTGTCAACTGGCACAAATTCAGAAACTGAGTTTGTAAATTTCTCTGTTTTGGATGGGTTCAAAGTAAAGAGCGAAGAATTTCAAATGGGTATCGATTACAATAGCAATCAGAACTTTGTTCCTCACAGTTACAATGGTTCTGAAAATGTACACAAGTCCATTCAAAGGAGCCACAGCAGTAACTGCTTTGATGGGAAGCCTGGTTTTCTCTTTCAACCCCACTATGATACTCTCTTAGATTCCTCAAACTTTCAAATGCAGACCATGAATTCTCCAGAAGACAATCAAGTGAGGAGAGTGTGCAGTACAGGAGATTTGCAGAACATGGAATCGACTCAAACGATCCACAGGGAAGGTTCGTTCTTAGAGGAAGCAAGCTTCAAAGTGGGCCGTTACAGTGCTGAAGAAAGAAAAGAGAGAATCTCTAAGTACAGAGCCAAGCGCGGCCAGAGGAACTTCAACAAGACGATTAAGTATGCATGCCGGAAGACACTGGCGGACAATCGACCACGCATACGCGGCAGATTCGCACGCAACGACGAGAGCGGCGAGAATTCCAAAGGCTCATGTTCAATCAGAAATGAAGAAGACGACGAGTTCTGGTTTGAAGGGTTGCATGAAGAGCAAGAGCAGATGACGCTGAGAGGACAGTACTTGAACATTTATGGAGATACTCATCAATTCCAATACCATAGCTTTTGGGATTGA 996 0.4478 MNSASTSTNAYAFDSSFLRHSSSDMASSNGCGDLFFSDPFPFPLFTPTDVVPQIPNSQTQHPILDETASSLDPFSSSFFSFSPPSTHLENLSLYQPLSTGTNSETEFVNFSVLDGFKVKSEEFQMGIDYNSNQNFVPHSYNGSENVHKSIQRSHSSNCFDGKPGFLFQPHYDTLLDSSNFQMQTMNSPEDNQVRRVCSTGDLQNMESTQTIHREGSFLEEASFKVGRYSAEERKERISKYRAKRGQRNFNKTIKYACRKTLADNRPRIRGRFARNDESGENSKGSCSIRNEEDDEFWFEGLHEEQEQMTLRGQYLNIYGDTHQFQYHSFWD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1079 331 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Prci10g1079 331 MobiDBLite consensus disorder prediction 268 287 - -
Prci10g1079 331 Pfam CCT motif 233 275 IPR010402 GO:0005515
Prci10g1079 331 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 72 291 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1079 Prci-Chr10 7183707 7185561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1079 229 278 C2C2-CO-like Transcription Factor Family AT5G57660 52.000 1.20e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci10g1079 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1079 - - pcin:129284634 643.269