Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1069 ATGGGCGGTTGCTGTTGCTGTTCTTCCAAAGAAACTGAACTGAGCGATCCACCTGCGTACTTCTATCACCCAAGAGCATCCGAGGAGCGTGTTCCTCTATCATCTAATCATGGTTCTGCCTCGGCTTTCTCCAGAGGGCTCCTAGTTGATACTAATCTTGAAACTTCAAGCCCTGATACTTATAGACCACCCCCTGTTCCTGTTCCTTACAGCAGTGTCACTTTGGTTGCCGCTCAAACTCCACCCAGGGTTAATGAAATTAGTGAAAATAAGACTAATGCATCCCTTCAATCAACAAATCCTAATTCAGTTCAAGAAATAGTTACTAGTGATGGTCATGGAAACTTGACCAAGTTGGAAGAGCAGAAGGAACTAGAGGGTAGAGTTCAGAGTGAGTTGGAACTGGACTCAGCTAAGGATTCAGAAATTGAACTTCAAAAGCTAGAAGAACCTGTCATTTTAGCAGAAGAGGAGGATGTATGTCCTATCTGTTTAGAAGAGTATGATGCGGAGAATCCAAAACTCAGCACAAAATGTGATCATCACTTTCACCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGAAAGCTGTCCTGTGTGTGATAAGGATGTTGTTTTCGAGTCTCCAATTGATTAA 639 0.4288 MGGCCCCSSKETELSDPPAYFYHPRASEERVPLSSNHGSASAFSRGLLVDTNLETSSPDTYRPPPVPVPYSSVTLVAAQTPPRVNEISENKTNASLQSTNPNSVQEIVTSDGHGNLTKLEEQKELEGRVQSELELDSAKDSEIELQKLEEPVILAEEEDVCPICLEEYDAENPKLSTKCDHHFHLACILEWMERSESCPVCDKDVVFESPID 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1069 212 Pfam Ring finger domain 160 201 IPR001841 -
Prci10g1069 212 ProSiteProfiles Zinc finger RING-type profile. 161 202 IPR001841 -
Prci10g1069 212 SMART ring_2 161 201 IPR001841 -
Prci10g1069 212 FunFam Putative E3 ubiquitin-protein ligase RHB1A 138 206 - -
Prci10g1069 212 SUPERFAMILY RING/U-box 154 207 - -
Prci10g1069 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 208 IPR013083 -
Prci10g1069 212 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 38 209 - -
Prci10g1069 212 CDD RING-H2_AIRP1-like 157 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1069 Prci-Chr10 7143227 7146225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1069 1 212 C3H Transcription Factor Family AT5G41350 52.778 9.78e-68 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1069 - - gmx:100816369 301.982