Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1063 ATGGCACGATGGTCAAGTTTCACAAACGGATCTTCCGAAGATTGCCTTGAAACTGTTGGAGGACATCAGGGTAATGACTGCTGCTTCGACGTTGGTCGTGTTATTAGAGATCAACTTGATGATGAAGTTAAACTTAAGTGCTTGTTTCATCAACTTCTATCAATTTATATAAAGGAGAATAATTCTGGAGGCAATATTCGTCCTGTACCTGTAATGCTTGGTGATGGTCAATCATTGGATTTATACAAACTGTTCTCCTTTGTGAACAAAAGAGGTGGGTATGCTTTGGTGTCGAAGAAAGGATTGTGGGGGTCTGTGACTAAGGAATTACATTTGAACCCTAAACTTTTGGCTTCGGTAAAATTAGTATATGACAAGTATTTGAATGAGTTTGAAGGATGGCTTGGCAAGGCTCGTGGAGGAAAGAATTTCAAAAGTGGGAATCATGGGTGTGATATGGATTTTAAGTCAGTGCCGTCAGAGCTAGTAAAAGAGTTTAGAGATGCATTATGTGGCAACGCTAGGTTGAAGGATGATGTATCTGTTCAGCTGCAATCACATAAAACGAGAAACTACATTGACTTGATTGATCACGAGGGTGAAATGAATTTGCCGGACAACAAAAATCAACCTACTATATGCGAGAATGTCCACAGTATCCTTGGTGATGCCAACTTGAAACTTTCTGACGGTGTTAAGGATGATCTTGCTAGCTTGAACTCAGAAGTTCCTGTGAAGGAATCTAATTCTCGCAAGCGCAAACGAGAAGCATTATCTTCAATGCTGAACTGGATCAGACGAATTGCGAAGTATCCTCATGATCCTTCCATTGAACCCATACCTGAAGCATCTAAGTGGAAGGAATATAAAGGACAAGATTTTTGGGTTCAGATACTTAGAGCAAGAGAGGCACTGCGGCTGAGGTCATGTGACAAACCAAAATGTGTGCAGCCTTCCATGCAGAGTTCTCTTTGTTTGCAGAAGCAAAAGATGCATCCTGCCATGTATGAGGATCATGCTGCTGTCAGTCGCCGTTCTACAGCAAAACTGAGATGGAGCAAAAGGCTGCCTACCTCAGTTAAATCTCAAATATGCTCTTGTTGCAATTCACATTCAGCTATCGAAAACAAGTTACCTTGTGCTGCCACCACTGAGGAAGAAAATGCTTCATTAGAGAAAACAACTGCAGCAGATGGTTTGCTGAGTGCAAAGGAAACAGCTAACTCGTCCACAGATGATACTGTTGAAAAACAAGTTGCTATAGGTCCTCTTTTTCAAGCTGAAGTGCCAAAATGGACTGGTGTAGTTTCTGAAAGTGATTCTAAATGGTTGGGCACGCAAGTATGGCCTTTGAAGGATAGGGAACTACAGTCTGTTACTGAGACCGGTATTATTGGAAGAGGAAGACAAGAGACTTGTAGCTGTAAAGTTCAAGGTTCTGTTGAATGTGTTAGATTTCATATTGCTGAGATGAGGATGAAGTTGAAGCTTGACTTGGGTTCGGCATTTTACCAGTGGGGATTTGATTGTATGGGGGAGGAAGTTTCACTTCAATGGACTGCTGAAGAAGAAAAGAAATTCAAGGATATTATGATGTTAAATTTGCCCTCCCAAAATAAGAGCAACCCGTTCAAGTATTTCCCAAAAAAGAAGAGGAGAAGCTTGGTTAGCTATTACTTCAATGTATTTCTTATTCAACGCAGGATTTATCAGAATCGTGTGACTCCAAGTAGTGTTGATAGTGACGATGATGAACATGAATTTGGATCTTTTACCGATGGCTTTGGGATGGAAGCTGTAAAAGGTCCAGGTTATAAGTTTCTAGAGTGTTCCCAGAACAACCGATGCACTGAATTGGAGTGA 1863 0.4101 MARWSSFTNGSSEDCLETVGGHQGNDCCFDVGRVIRDQLDDEVKLKCLFHQLLSIYIKENNSGGNIRPVPVMLGDGQSLDLYKLFSFVNKRGGYALVSKKGLWGSVTKELHLNPKLLASVKLVYDKYLNEFEGWLGKARGGKNFKSGNHGCDMDFKSVPSELVKEFRDALCGNARLKDDVSVQLQSHKTRNYIDLIDHEGEMNLPDNKNQPTICENVHSILGDANLKLSDGVKDDLASLNSEVPVKESNSRKRKREALSSMLNWIRRIAKYPHDPSIEPIPEASKWKEYKGQDFWVQILRAREALRLRSCDKPKCVQPSMQSSLCLQKQKMHPAMYEDHAAVSRRSTAKLRWSKRLPTSVKSQICSCCNSHSAIENKLPCAATTEEENASLEKTTAADGLLSAKETANSSTDDTVEKQVAIGPLFQAEVPKWTGVVSESDSKWLGTQVWPLKDRELQSVTETGIIGRGRQETCSCKVQGSVECVRFHIAEMRMKLKLDLGSAFYQWGFDCMGEEVSLQWTAEEEKKFKDIMMLNLPSQNKSNPFKYFPKKKRRSLVSYYFNVFLIQRRIYQNRVTPSSVDSDDDEHEFGSFTDGFGMEAVKGPGYKFLECSQNNRCTELE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1063 620 SMART bright_3 44 137 IPR001606 GO:0003677
Prci10g1063 620 ProSiteProfiles ARID domain profile. 43 136 IPR001606 GO:0003677
Prci10g1063 620 SMART ELM2_2 419 470 IPR000949 -
Prci10g1063 620 Pfam ARID/BRIGHT DNA binding domain 49 132 IPR001606 GO:0003677
Prci10g1063 620 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 40 612 - -
Prci10g1063 620 Gene3D - 35 143 IPR036431 GO:0003677
Prci10g1063 620 CDD ARID 49 132 - -
Prci10g1063 620 SUPERFAMILY ARID-like 39 138 IPR036431 GO:0003677
Prci10g1063 620 SMART ARID_2 40 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1063 Prci-Chr10 7132043 7138558 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Prci10g1063 ARID 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1063 - - gmx:100819320 694.115