LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g1054	ATGCCATCATGGTGGGGAAAGTCTTCCTCCAAAGAGGGGAAGAAGAAAGAAAATAAGGAAAGTATTATTTATACAATACAGCGCAAGTTAAAAAGCACTTCGGAAGACAAGTGCAACAGTGGATTGGGAGGATCTAGGAGACATACTGTCTCAAATAAGAGATCTCAATCTCCTGTGTTTTCAGGATCAGCATCTCCCTCGACACATGTATCCCGATGTCAAAGTTTTGCAGAAAGGCCTCATGCCCAAGCACTCCCATTACCTGGGCCGAAACCTTCTACCATCTGTCGTACAAACTCTGCAATTAGTGTAGCATCAAAATCAGAAAATGCTAGAGATTCTAAGCCATCTCAGCATTTTTCCCTACCGAAACCTGGATGTGCTTCTAACCAGAGAGAACCTACTAACGCTGAGGAAGATATTGCCACTGCATCCATTTCCAGTGACACCTCTAATGACAGTGACTGCCCATCCAATTCACGTCACCTTAGTTCTCTGGCATTTGCCTGTGCAAATTTAAGAAGAATCACTGTTAACAGTTCCTTCTGCATGGTGCACGAGGATCAATCATCTGTGACTCTCCCAAAGAACACAAGAGCCTTATCAGAACCAGTTTCCCAACTGTGCAATAATCAGTCTTTGTCTACCTCACCTAAAGGGGGGGCTTTGCATCTGAAGAATCTGCAAATGGTTCACCCAGCTGGTTTATGCAGTGCTCCTGATAGTTCATTGTCAAGTCCTTGTAGAAGTCCAATGAGAGCACTTGGTCCTGAGCAAGATTTAAATGCTGTATTCTGGACAGGAAAGCCTTATTCCAATGTTACTTCTGGACACTGTTCAAGTTCCGGCTCAGGTCATAATTCTGGGCATAACTCTGTTGTTGATCTGTTGGGACAGATATGTGGTCCACAGAGCAGGGGCAGCGCTGAGTTCTCTCCAATACCTAGTCCCAGAATGACAAGCCCTGGTCCCAGCTCAAGGATACACAGTGGTACTGTCACCCCTCTGCATCCACGAGCAAGAAGCACTGCATCGGAGTCACCTAAAATACATCCTGACGATGGGAAACAACAAAGTCATCGGTTACCTCTTCCTCCAATAGCAATCAATAATTCTTGCCCTTTTTCTCCAGCCTATTCTGCAGCCACAACTCCTTCTGCGCCACGTAGTCCTAGCAGAGCTGAAAATCTAACGAGCCCTGGTTCACGCTGGAAAAAGGGGCAGCTGCTTGGAAGGGGAACATTTGGCCATGTATATCTTGGCTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAATACTCCTTTCAGATGACGCAAAATCAAGGGAATGCGCACAGCAACTATGTCAAGAAATTACACTGCTAAGTTGCTTGTGGCATCCAAATATAGTTCAATATTATGGATCTGAGACGGTAGACGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCTATCTATAAACTTCTTCAAGAATATGGCAAGTTTGGTGAAAATGCTATTCGTAATTTTACTCGGCAAATTCTGTCAGGTCTTGCATATTTACATGCTAAGAACACGGTCCATAGGGACATAAAAGGAGCAAATATATTGGTGGATCCCAATGGACGGGTAAAATTGGCAGATTTTGGAATGGCAAAACATATGAATGGGCAATCTTGTCCATTATCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGCTGTAATCTCGCTGTTGATATATGGAGCCTTGGCTGCACTGTTTTGGAGATGGCTACTACAAAGCCACCTTGGAGCCAGTATGAAGGGATTGCTGCCATGTTTAAGATTGGGAACAGCAAGGAACTTCCTACAATTCCAAATCATTTATCAGAAGATGGAAAAGAATTTGTCAGGCTCTGTTTGCAGAGGAACCCACTAAATCGACCGTCAGCTGCTCAACTTCTGGAGCATCCATTTATTAAAAATTCTACGATGGAGAGACCCAGTCCGGCTGCTGATCATTCAGAGCTATCTGCTTTTACAAATGCAGTGAGATCTCTGGCCATTGGAACTGCAAAACAAGAGTCATGCATAGACTCAGAAGGGGCTGGTATCTATCCATCTAGAAGCTTGAAACTTGGTTCAAATTTGAGTAATACCCATGGATCAAGGAACATATCATGCCCTGTTTCTCCCATTGGAAGCCCACATTTGCCATCGAGATTGTTGCACGCCAGCGGAAGGACATCTCCCTCCCCAATATCAAGTCCTCATACTGCATCTGGTTCATCCACCCCAGTGACAGGCGGTAGTGGTGCGATCCCATTCCACCAAGCAAAGCAGCCAACTTTTGCACATGAAGGTGTTGATAAGATCCAGAGGTCTCAAATCAGTTATAAGTACGACGCAAAGCATGACCCGTCTTGGGGGATTCCACAAACTACTCACGCCTCCCAGCATACAATGTCATTCGATACTGGTGCTTTGGCAAACCAGATCTGGAGGCCTGTTCAGCAAGACCCAAGAGAGTTTTATAGCGGTGATAAGTCATGCTTGGCTGATTGCGTTTCACAGCAGCTGTTAAGAGATCATACCAGGCTTAACTCATCCATAAATCCCAAGCCCAGCACCCTAATGCATGGCTTCATAAGTGGTCCGTGGCCTGTATCTCAATGA	2676	0.4473	MPSWWGKSSSKEGKKKENKESIIYTIQRKLKSTSEDKCNSGLGGSRRHTVSNKRSQSPVFSGSASPSTHVSRCQSFAERPHAQALPLPGPKPSTICRTNSAISVASKSENARDSKPSQHFSLPKPGCASNQREPTNAEEDIATASISSDTSNDSDCPSNSRHLSSLAFACANLRRITVNSSFCMVHEDQSSVTLPKNTRALSEPVSQLCNNQSLSTSPKGGALHLKNLQMVHPAGLCSAPDSSLSSPCRSPMRALGPEQDLNAVFWTGKPYSNVTSGHCSSSGSGHNSGHNSVVDLLGQICGPQSRGSAEFSPIPSPRMTSPGPSSRIHSGTVTPLHPRARSTASESPKIHPDDGKQQSHRLPLPPIAINNSCPFSPAYSAATTPSAPRSPSRAENLTSPGSRWKKGQLLGRGTFGHVYLGFNSESGEMCAMKEVILLSDDAKSRECAQQLCQEITLLSCLWHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGKFGENAIRNFTRQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHMNGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGIAAMFKIGNSKELPTIPNHLSEDGKEFVRLCLQRNPLNRPSAAQLLEHPFIKNSTMERPSPAADHSELSAFTNAVRSLAIGTAKQESCIDSEGAGIYPSRSLKLGSNLSNTHGSRNISCPVSPIGSPHLPSRLLHASGRTSPSPISSPHTASGSSTPVTGGSGAIPFHQAKQPTFAHEGVDKIQRSQISYKYDAKHDPSWGIPQTTHASQHTMSFDTGALANQIWRPVQQDPREFYSGDKSCLADCVSQQLLRDHTRLNSSINPKPSTLMHGFISGPWPVSQ	891

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	1	20	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	745	771	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	344	358	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	304	367	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	30	137	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	380	403	-	-
	Prci10g1054	891	FunFam	Mitogen-activated protein kinase kinase kinase	402	683	-	-
	Prci10g1054	891	SMART	serkin_6	404	660	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1054	891	ProSitePatterns	Protein kinases ATP-binding region signature.	410	433	IPR017441	GO:0005524
	Prci10g1054	891	SUPERFAMILY	Protein kinase-like (PK-like)	402	743	IPR011009	-
	Prci10g1054	891	Gene3D	Transferase(Phosphotransferase) domain 1	402	686	-	-
	Prci10g1054	891	ProSiteProfiles	Protein kinase domain profile.	404	660	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	36	74	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	727	771	-	-
	Prci10g1054	891	Pfam	Protein kinase domain	405	660	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g1054	891	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	73	683	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	93	137	-	-
	Prci10g1054	891	CDD	STKc_MEKK1_plant	403	660	-	-
	Prci10g1054	891	MobiDBLite	consensus disorder prediction	305	341	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g1054	Prci-Chr10	7040649	7049168	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g1054	1	869	MAP Kinase Kinase Kinase	AT1G63700	58.184	0.0	850

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Prci10g1054		Pkinase	1.6e-71	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g1054	K20717		-	vvi:100263296	1051.97