Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1049 ATGGCGAGACGATCGTCTTCAAAGGTAGCCGGTGTAAGCCAAGTGTGCGAGACAGGTTGCAGCTCACGACTGTGCAGAATCTTGAATTTTCGAGAAGGTCAAACCACGAGAAGATTGGTTTCTAATACGGGACATTCGAATATACATGCCATTGCTGCAGATAATGTAAACTCAGGAAGTAGCCCGGATGTGCTAGCCATAGTTGACGAGAAGTGCGCTCACAATCACGCTAAAGTAAATTCCAAGAGGAGTTATCATGGTTGTAAGAGTATAAGCTGTGTGAAGGTTACTGACCAGGTAACAACAGTTCAGGGAAATGAAGCAACAAACAAGGTTGTAACTCAGAATTTCATCAACTGGAAATCTCTACGCAAAGATGGAGCAATCTCCCAACCCCATCAATTCTTCGATGCTTTACAGATTTTATACCCAAACAAGGAACTCCTCCTAAAAATTCAAGACGAAAACTCTCAATCAGTAAATGAACAGTATCAGGCAGGGCAAAAAATGTTGACCAGATTTCCCTTTGAGTCCAAATGGATCAACTCTCAAAGAAGTTATGCAACTCAACGTGAAACTCCGTACGCTGGCTGTCACTGTCCTCTTCATTCTCCTGGGACATATAATGTGCCATCTGTGAAGCACTCACATTTTCCTTTTTCCCATGCAAGGGGAAATTTAAGGCATGCCATGGGATTAAGGAAAAAAGGACGGTGGTGGGAGACTGCTGATAAAATGTTGCGTAAACTTCCCTATAGTTGCCAAGGAATTAAAGATGGTGATAAAGCACAGGGATTGGAGAGTGTTGGGAGGAAATCAGTCAGTAGTGTCCATTTTGGTTTTGGAAAAGGGGGGAAGTTATCACTTGACTTCAAGGAGAGAGAGAGAATGAAGATAAGAGACTTTATGTTATGTAGAGGGCAGAACGCTGTTTCGGCTCATGAAAGTTGTGGTAGGAACATAACAAGAACTTCAGTCAGCCCTTCACTGCAAAATAAACAGAACATGCATGTTGAGTCTACGGAAAATCTGTCTGAGATATTAAATTGCAGAATTGAGGAGCAGAACAATGAACCACCAGCGGCTGCTGTGAAGACAGTTAAAAATGATTTGCATAGTGTCAAAGAAATTGTCGAAAGGAGTCCTCCTGACAGTAGTTATGCATATTATGGGATTTCAACAGGTTTCGAGAAGTTCATAAAATCTGGTAGTGACTTACATCCCAAAGGAATCAGACATATGGATGTGCCCTCTGAACAAGGTAGCAGAAATATGCACAGTCCCACTCAGAGCTTTGACGTGGATATTACAAGTGAAGGAAATGGACCTTTTATGGATTCACCTAATGTGGTCGATGATCTGAGCTCCTCACCAGAAGTTGCTTCATCAAGCTCTTCATCTAGTCAGAGTGCAGATGATCCTACGGACATGAGAAACATAATTGATGAGCGCCTCAGTGCTAAATCTGCTACTAAGCAAGTTATGAGAGGGGAAATCACCAATCCACCAACCGCAGCTTCCCAACCTGATGAGCTGCCAATTCAAACAGTAAATGGTAATTCTAAAGAACACCACTCTGTTGATCTTACAAGATCCTCTTCGGGTCTTGTGGATGATTTAATTACATCAAGGGACATGTCAGTGTCAGGCTGCGACGGGGAAATTTTGAGGTCGTTGAGCCTGAAATGGGATGAACTGGTGATGAAGTGTGAGTTACCAGATCATTTACTGGATCCTTCCGCCTTTGAGGAACTAAAAAGGTTGACGAACCAACTCTCTTACACTACAATCTTGTTTGACTATGTCATGGAAGTCTTCATGGAGCGGTACCAGCACTTGTGTAGATTTCCGCATCATATTTCGATCGAGAAACCAAATGTCCAAGCATATGTCTTGAAGAGAATCATGGTTCATGAGGTTAAAAAATTCATTGACTTGCATTATCACCAGCACCATCGTCCACCACCAAGAACGCTAGAACAGCTTGTCGAAAAGGAGTTGAATAAACGGCGATCATGGCTAAATGTTCAGGTTGATATTGATGATATTGCGACAGAAGTGCAGGAAGATGTTCTCCAATCACTAATATTGGAAATTATATCTGAGATGGATACCAGAGAAGCGTGA 2127 0.4231 MARRSSSKVAGVSQVCETGCSSRLCRILNFREGQTTRRLVSNTGHSNIHAIAADNVNSGSSPDVLAIVDEKCAHNHAKVNSKRSYHGCKSISCVKVTDQVTTVQGNEATNKVVTQNFINWKSLRKDGAISQPHQFFDALQILYPNKELLLKIQDENSQSVNEQYQAGQKMLTRFPFESKWINSQRSYATQRETPYAGCHCPLHSPGTYNVPSVKHSHFPFSHARGNLRHAMGLRKKGRWWETADKMLRKLPYSCQGIKDGDKAQGLESVGRKSVSSVHFGFGKGGKLSLDFKERERMKIRDFMLCRGQNAVSAHESCGRNITRTSVSPSLQNKQNMHVESTENLSEILNCRIEEQNNEPPAAAVKTVKNDLHSVKEIVERSPPDSSYAYYGISTGFEKFIKSGSDLHPKGIRHMDVPSEQGSRNMHSPTQSFDVDITSEGNGPFMDSPNVVDDLSSSPEVASSSSSSSQSADDPTDMRNIIDERLSAKSATKQVMRGEITNPPTAASQPDELPIQTVNGNSKEHHSVDLTRSSSGLVDDLITSRDMSVSGCDGEILRSLSLKWDELVMKCELPDHLLDPSAFEELKRLTNQLSYTTILFDYVMEVFMERYQHLCRFPHHISIEKPNVQAYVLKRIMVHEVKKFIDLHYHQHHRPPPRTLEQLVEKELNKRRSWLNVQVDIDDIATEVQEDVLQSLILEIISEMDTREA 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1049 708 Pfam Domain of unknown function (DUF4378) 554 698 IPR025486 -
Prci10g1049 708 Pfam Protein of unknown function (DUF3741) 115 157 IPR022212 -
Prci10g1049 708 Coils Coil 338 358 - -
Prci10g1049 708 MobiDBLite consensus disorder prediction 420 437 - -
Prci10g1049 708 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 99 355 - -
Prci10g1049 708 MobiDBLite consensus disorder prediction 450 475 - -
Prci10g1049 708 MobiDBLite consensus disorder prediction 500 523 - -
Prci10g1049 708 MobiDBLite consensus disorder prediction 500 529 - -
Prci10g1049 708 MobiDBLite consensus disorder prediction 408 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1049 Prci-Chr10 7003872 7007876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1049 555 701 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 29.730 9.99e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1049 - - pcin:129321773 1411.36